Difference between revisions of "Ec-23 000570"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9523 RXN-9523] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-octanoyl-[acyl-carrier...")
(Created page with "Category:Gene == Gene Ec-23_000570 == * left end position: ** 598030 * transcription direction: ** POSITIVE * right end position: ** 608023 * centisome position: ** 12.357...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9523 RXN-9523] ==
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== Gene Ec-23_000570 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 598030
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* common name:
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* transcription direction:
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** 3-oxo-octanoyl-[acyl-carrier protein] synthase
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** POSITIVE
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** Thiolase-like, subgroup
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* right end position:
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** Beta-ketoacyl synthase, N-terminal
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** 608023
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** beta-ketoacyl synthase, partial
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* centisome position:
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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** 12.357352   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0017_0062
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** Esi0017_0062
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** MPDH1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[MANNPDEHYDROG-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[Hexanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 a hexanoyl-[acyl-carrier-protein][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 3-oxo-octanoyl-[acp][c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_000650]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-12_000640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-27_002090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-27_003480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[MANNIDEG-PWY]]
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* [[PWY-6531]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=598030}}
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{{#set: common name=3-oxo-octanoyl-[acyl-carrier protein] synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: right end position=608023}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: centisome position=12.357352    }}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: common name=Esi_0017_0062|Esi0017_0062|MPDH1}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: reaction associated=MANNPDEHYDROG-RXN}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: pathway associated=MANNIDEG-PWY|PWY-6531}}
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{{#set: gene associated=Ec-12_000650|Ec-12_000640|Ec-27_002090|Ec-27_003480}}
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{{#set: in pathway=PWY-5971}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:44, 21 March 2018

Gene Ec-23_000570

  • left end position:
    • 598030
  • transcription direction:
    • POSITIVE
  • right end position:
    • 608023
  • centisome position:
    • 12.357352
  • Synonym(s):
    • Esi_0017_0062
    • Esi0017_0062
    • MPDH1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-23_000570&oldid=29059"