Difference between revisions of "PWY-7410"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYC3PDEHYDROGBIOSYN-RXN GLYC3PDEHYDROGBIOSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] == * direction: ** REVERSIBLE * common name: ** choline dehydrogenase * ec number:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYC3PDEHYDROGBIOSYN-RXN GLYC3PDEHYDROGBIOSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHD-RXN CHD-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** glycerol-3-phosphate dehydrogenase [NAD+]
+
** choline dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.94 EC-1.1.1.94]
+
** [http://enzyme.expasy.org/EC/1.1.99.1 EC-1.1.99.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
** 1 [[Acceptor]][c] '''+''' 1 [[CHOLINE]][c] '''<=>''' 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[Donor-H2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD(P)H[c] '''+''' 1 H+[c] '''+''' 1 glycerone phosphate[c] '''=>''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 NAD(P)+[c]
+
** 1 an oxidized unknown electron acceptor[c] '''+''' 1 choline[c] '''<=>''' 1 betaine aldehyde[c] '''+''' 1 an reduced unknown electron acceptor[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-19_004200]]
+
* [[Ec-00_005920]]
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-19_001930]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-27_006990]]
+
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***GO-TERM
 
***GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
+
* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981]
+
* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17433 17433]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00844 R00844]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01025 R01025]
−
** [http://www.genome.jp/dbget-bin/www_bget?R05680 R05680]
+
* UNIPROT:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/P17444 P17444]
−
{{#set: common name=glycerol-3-phosphate dehydrogenase [NAD+]}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-1.1.1.94}}
+
{{#set: common name=choline dehydrogenase}}
−
{{#set: gene associated=Ec-19_004200|Ec-19_001930|Ec-27_006990}}
+
{{#set: ec number=EC-1.1.99.1}}
−
{{#set: in pathway=PWY-5667|PWY-5981|PWY0-1319}}
+
{{#set: gene associated=Ec-00_005920}}
 +
{{#set: in pathway=CHOLINE-BETAINE-ANA-PWY|BETSYN-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 20:53, 17 March 2018

Reaction CHD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • choline dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an oxidized unknown electron acceptor[c] + 1 choline[c] <=> 1 betaine aldehyde[c] + 1 an reduced unknown electron acceptor[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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