Difference between revisions of "Ec-12 006850"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FOLYLPOLYGLUTAMATESYNTH-RXN FOLYLPOLYGLUTAMATESYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
(Created page with "Category:Gene == Gene Ec-12_006850 == * left end position: ** 6198863 * transcription direction: ** NEGATIVE * right end position: ** 6204477 * centisome position: ** 74.3...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FOLYLPOLYGLUTAMATESYNTH-RXN FOLYLPOLYGLUTAMATESYNTH-RXN] ==
+
== Gene Ec-12_006850 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 6198863
−
* common name:
+
* transcription direction:
−
** tetrahydrofolylpolyglutamate synthase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/6.3.2.17 EC-6.3.2.17]
+
** 6204477
 +
* centisome position:
 +
** 74.36209   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0226_0036
 +
** Esi0226_0036
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3.1.1.64-RXN]]
−
** 1 [[THF-GLU-N]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[THF-GLU-N]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 a tetrahydrofolate[c] '''+''' 1 L-glutamate[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 a tetrahydrofolate[c]
+
* Reaction: [[CARBOXYLESTERASE-RXN]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RETINYL-PALMITATE-ESTERASE-RXN]]
−
* Gene: [[Ec-01_004980]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-10711]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-10767]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-12252]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: automated-name-match
−
* Gene: [[Ec-07_002300]]
+
* Reaction: [[RXN-12575]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: automated-name-match
−
== Pathways  ==
+
* Reaction: [[RXNQT-4366]]
−
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-6857]]
 +
* [[PWY-6303]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=6198863}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04241 R04241]
+
{{#set: transcription direction=NEGATIVE}}
−
* UNIPROT:
+
{{#set: right end position=6204477}}
−
** [http://www.uniprot.org/uniprot/P15925 P15925]
+
{{#set: centisome position=74.36209    }}
−
** [http://www.uniprot.org/uniprot/Q9JVC6 Q9JVC6]
+
{{#set: common name=Esi_0226_0036|Esi0226_0036}}
−
** [http://www.uniprot.org/uniprot/P43775 P43775]
+
{{#set: reaction associated=3.1.1.64-RXN|CARBOXYLESTERASE-RXN|RETINYL-PALMITATE-ESTERASE-RXN|RXN-10711|RXN-10767|RXN-12252|RXN-12575|RXNQT-4366}}
−
** [http://www.uniprot.org/uniprot/Q9PNK6 Q9PNK6]
+
{{#set: pathway associated=PWY-6857|PWY-6303}}
−
** [http://www.uniprot.org/uniprot/Q9CGE0 Q9CGE0]
+
−
** [http://www.uniprot.org/uniprot/Q50990 Q50990]
+
−
** [http://www.uniprot.org/uniprot/P48760 P48760]
+
−
** [http://www.uniprot.org/uniprot/P08192 P08192]
+
−
** [http://www.uniprot.org/uniprot/O13492 O13492]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=tetrahydrofolylpolyglutamate synthase}}
+
−
{{#set: ec number=EC-6.3.2.17}}
+
−
{{#set: gene associated=Ec-01_004980|Ec-07_002300}}
+
−
{{#set: in pathway=PWY-2161}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 19:48, 21 March 2018

Gene Ec-12_006850

  • left end position:
    • 6198863
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 6204477
  • centisome position:
    • 74.36209
  • Synonym(s):
    • Esi_0226_0036
    • Esi0226_0036

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_006850&oldid=29437"