Difference between revisions of "R344-RXN"

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(Created page with "Category:Gene == Gene Ec-10_005260 == * left end position: ** 5341198 * transcription direction: ** NEGATIVE * right end position: ** 5349399 * centisome position: ** 82.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R344-RXN R344-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** cob(I)yrinic acid a,c-diamide...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-10_005260 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R344-RXN R344-RXN] ==
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* left end position:
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* direction:
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** 5341198
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** cob(I)yrinic acid a,c-diamide adenosyltransferase
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* right end position:
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* ec number:
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** 5349399
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** [http://enzyme.expasy.org/EC/2.5.1.17 EC-2.5.1.17]
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* centisome position:
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** 82.15983   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0006_0044
 
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** Esi0006_0044
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[3.2.1.96-RXN]]
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* With identifiers:
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** 1 [[CPD-694]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[P3I]][c] '''+''' 1 [[CPD-690]][c]
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* With common name(s):
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** 1 cob(I)yrinate a,c-diamide[c] '''+''' 1 ATP[c] '''=>''' 1 PPPi[c] '''+''' 1 adenosyl-cobyrinate a,c-diamide[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_010830]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY-5509]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5509 PWY-5509]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5508]], adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5508 PWY-5508]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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== External links  ==
 
== External links  ==
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{{#set: left end position=5341198}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11528 11528]
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{{#set: right end position=5349399}}
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* LIGAND-RXN:
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{{#set: centisome position=82.15983    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05220 R05220]
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{{#set: common name=Esi_0006_0044|Esi0006_0044}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.2.1.96-RXN}}
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{{#set: common name=cob(I)yrinic acid a,c-diamide adenosyltransferase}}
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{{#set: ec number=EC-2.5.1.17}}
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{{#set: gene associated=Ec-06_010830}}
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{{#set: in pathway=PWY-5509|PWY-5508}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:49, 21 March 2018

Reaction R344-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cob(I)yrinic acid a,c-diamide adenosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 cob(I)yrinate a,c-diamide[c] + 1 ATP[c] => 1 PPPi[c] + 1 adenosyl-cobyrinate a,c-diamide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5509, adenosylcobalamin biosynthesis from cobyrinate a,c-diamide I: PWY-5509
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-5508, adenosylcobalamin biosynthesis from cobyrinate a,c-diamide II: PWY-5508
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=R344-RXN&oldid=29558"