Difference between revisions of "RXN0-2141"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-08_004960 == * left end position: ** 4730366 * transcription direction: ** POSITIVE * right end position: ** 4742063 * centisome position: ** 70.6...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-08_004960 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] ==
−
* left end position:
+
* direction:
−
** 4730366
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Beta-ketoacyl synthase, N-terminal
−
* right end position:
+
** Thiolase-like, subgroup
−
** 4742063
+
** beta-ketoacyl synthase, partial
−
* centisome position:
+
** 3-oxoacyl-[acyl-carrier-protein] synthase
−
** 70.63340   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0211_0043
 
−
** Esi0211_0043
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[3.2.1.39-RXN]]
+
* With identifiers:
 +
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c]
 +
* With common name(s):
 +
** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a (3Z)-dec-3-enoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-27_003480]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-27_002090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-12_000640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-12_000650]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: ec-number
+
*** Assignment: GO-TERM
−
* Reaction: [[3.2.1.6-RXN]]
+
== Pathways  ==
 +
* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: go-term
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=4730366}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
−
{{#set: right end position=4742063}}
+
{{#set: common name=Thiolase-like, subgroup}}
−
{{#set: centisome position=70.63340    }}
+
{{#set: common name=beta-ketoacyl synthase, partial}}
−
{{#set: common name=Esi_0211_0043|Esi0211_0043}}
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
{{#set: reaction associated=3.2.1.39-RXN|3.2.1.6-RXN}}
+
{{#set: ec number=EC-2.3.1.41}}
 +
{{#set: gene associated=Ec-27_003480|Ec-27_002090|Ec-12_000640|Ec-12_000650}}
 +
{{#set: in pathway=PWY0-862}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:49, 21 March 2018

Reaction RXN0-2141

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Beta-ketoacyl synthase, N-terminal
    • Thiolase-like, subgroup
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-862, (5Z)-dodec-5-enoate biosynthesis: PWY0-862
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-2141&oldid=29567"