Difference between revisions of "RXN0-5359"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] == * direction: ** REVERSIBLE * common name: ** aminomethyltransferase ** Aminom...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5359 RXN0-5359] == * direction: ** LEFT-TO-RIGHT * common name: ** diguanylate cyclase/phospho...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5359 RXN0-5359] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** aminomethyltransferase
+
** diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
−
** Aminomethyltransferase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.2.10 EC-2.1.2.10]
+
** [http://enzyme.expasy.org/EC/2.7.7.65 EC-2.7.7.65]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THF-GLU-N]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c]
+
** 2 [[GTP]][c] '''=>''' 2 [[PPI]][c] '''+''' 1 [[C-DI-GMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tetrahydrofolate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c] '''<=>''' 1 ammonium[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c]
+
** 2 GTP[c] '''=>''' 2 diphosphate[c] '''+''' 1 cyclic di-3',5'-guanylate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-24_001010]]
+
* Gene: [[Ec-23_001790]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-20_004610]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-00_002470]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-07_004110]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 38: Line 26:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16945 16945]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04125 R04125]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08057 R08057]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P25285 P25285]
+
{{#set: common name=diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)}}
−
** [http://www.uniprot.org/uniprot/P28337 P28337]
+
{{#set: ec number=EC-2.7.7.65}}
−
** [http://www.uniprot.org/uniprot/P27248 P27248]
+
{{#set: gene associated=Ec-23_001790}}
−
** [http://www.uniprot.org/uniprot/Q9UZP8 Q9UZP8]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/Q9JVP2 Q9JVP2]
+
−
** [http://www.uniprot.org/uniprot/P48728 P48728]
+
−
** [http://www.uniprot.org/uniprot/P49364 P49364]
+
−
** [http://www.uniprot.org/uniprot/P49095 P49095]
+
−
** [http://www.uniprot.org/uniprot/P49363 P49363]
+
−
** [http://www.uniprot.org/uniprot/P54260 P54260]
+
−
** [http://www.uniprot.org/uniprot/P49361 P49361]
+
−
** [http://www.uniprot.org/uniprot/P49362 P49362]
+
−
** [http://www.uniprot.org/uniprot/O49954 O49954]
+
−
** [http://www.uniprot.org/uniprot/P93256 P93256]
+
−
** [http://www.uniprot.org/uniprot/O32955 O32955]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=aminomethyltransferase}}
+
−
{{#set: common name=Aminomethyltransferase}}
+
−
{{#set: ec number=EC-2.1.2.10}}
+
−
{{#set: gene associated=Ec-24_001010|Ec-20_004610|Ec-00_002470|Ec-07_004110}}
+
−
{{#set: in pathway=GLYCLEAV-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:50, 21 March 2018

Reaction RXN0-5359

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 GTP[c] => 2 diphosphate[c] + 1 cyclic di-3',5'-guanylate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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