Difference between revisions of "Ec-17 003830"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4141 RXNQT-4141] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP-L-galactose/GDP-D-glu...")
(Created page with "Category:Gene == Gene Ec-17_003830 == * left end position: ** 4050964 * transcription direction: ** NEGATIVE * right end position: ** 4052249 * centisome position: ** 84.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXNQT-4141 RXNQT-4141] ==
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== Gene Ec-17_003830 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4050964
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* common name:
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* transcription direction:
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** GDP-L-galactose/GDP-D-glucose phosphorylase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.7.69 EC-2.7.7.69]
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** 4052249
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* centisome position:
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** 84.4312   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0379_0012
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** Esi0379_0012
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[HOMOGENTISATE-12-DIOXYGENASE-RXN]]
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** 1 [[Pi]][c] '''+''' 1 [[GDP-L-GALACTOSE]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPDQT-4]][c]
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* With common name(s):
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** 1 phosphate[c] '''+''' 1 GDP-β-L-galactose[c] '''=>''' 1 GDP[c] '''+''' 1 H+[c] '''+''' 1 β-L-galactose 1-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-15_001960]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[TYRFUMCAT-PWY]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4050964}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27698 27698]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4052249}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07678 R07678]
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{{#set: centisome position=84.4312    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0379_0012|Esi0379_0012}}
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{{#set: common name=GDP-L-galactose/GDP-D-glucose phosphorylase}}
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{{#set: reaction associated=HOMOGENTISATE-12-DIOXYGENASE-RXN}}
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{{#set: ec number=EC-2.7.7.69}}
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{{#set: pathway associated=TYRFUMCAT-PWY}}
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{{#set: gene associated=Ec-15_001960}}
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{{#set: in pathway=PWY-882}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:51, 21 March 2018

Gene Ec-17_003830

  • left end position:
    • 4050964
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4052249
  • centisome position:
    • 84.4312
  • Synonym(s):
    • Esi_0379_0012
    • Esi0379_0012

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_003830&oldid=29834"