Difference between revisions of "GLYCPDIESTER-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16622 RXN-16622] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glycerophosph...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16622 RXN-16622] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCPDIESTER-RXN GLYCPDIESTER-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** NAD(P)-binding domain
+
** glycerophosphodiester phosphodiesterase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/3.1.4.46 EC-3.1.4.46]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3R-7Z-3-hydroxy-hexadec-7-enoyl-ACPs]][c]
+
** 1 [[Glycerophosphodiesters]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[Alcohols]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a (7Z)-3-oxo-hexadec-7-enoyl-[acp][c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R,7Z)-3-hydroxy-hexadec-7-enoyl-[acp][c]
+
** 1 a glycerophosphodiester[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 sn-glycerol 3-phosphate[c] '''+''' 1 an alcohol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-01_007100]]
+
* Gene: [[Ec-23_002410]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-23_002720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
+
* [[PWY-6952]], glycerophosphodiester degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6952 PWY-6952]
−
** '''10''' reactions found over '''14''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 28: Line 31:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00857 R00857]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q99387 Q99387]
 +
** [http://www.uniprot.org/uniprot/P10908 P10908]
 +
** [http://www.uniprot.org/uniprot/Q06282 Q06282]
 +
** [http://www.uniprot.org/uniprot/Q9V208 Q9V208]
 +
** [http://www.uniprot.org/uniprot/P09394 P09394]
 +
** [http://www.uniprot.org/uniprot/Q9S3K5 Q9S3K5]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=NAD(P)-binding domain}}
+
{{#set: common name=glycerophosphodiester phosphodiesterase}}
−
{{#set: ec number=EC-1.1.1.100}}
+
{{#set: ec number=EC-3.1.4.46}}
−
{{#set: gene associated=Ec-01_007100}}
+
{{#set: gene associated=Ec-23_002410|Ec-23_002720}}
−
{{#set: in pathway=PWY-7664}}
+
{{#set: in pathway=PWY-6952}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:53, 21 March 2018

Reaction GLYCPDIESTER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glycerophosphodiester phosphodiesterase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6952, glycerophosphodiester degradation: PWY-6952
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=GLYCPDIESTER-RXN&oldid=29981"