Difference between revisions of "RXN-8988"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-10_000880 == * left end position: ** 965607 * transcription direction: ** POSITIVE * right end position: ** 971432 * centisome position: ** 14.853...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinate--CoA ligase (GDP-fo...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8988 RXN-8988] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** Succinate--CoA ligase (GDP-forming), alpha subunit |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/6.2.1.4 EC-6.2.1.4] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
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| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[ITACONATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[CPD-1137]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[Pi]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 itaconate[c] '''+''' 1 coenzyme A[c] '''+''' 1 GTP[c] '''=>''' 1 itaconyl-CoA[c] '''+''' 1 GDP[c] '''+''' 1 phosphate[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Ec-10_000030]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
| − | *** Assignment: | + | *** Assignment: EC-NUMBER |
| − | * | + | == Pathways == |
| + | * [[PWY-5749]], itaconate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
| − | *** | + | *** Tool: [[pathwaytools]] |
| − | + | ||
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| − | + | ||
| − | + | ||
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== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02405 R02405] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=Succinate--CoA ligase (GDP-forming), alpha subunit}} |
| − | {{#set: | + | {{#set: ec number=EC-6.2.1.4}} |
| − | {{#set: | + | {{#set: gene associated=Ec-10_000030}} |
| − | {{#set: | + | {{#set: in pathway=PWY-5749}} |
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 20:53, 21 March 2018
Contents
Reaction RXN-8988
- direction:
- LEFT-TO-RIGHT
- common name:
- Succinate--CoA ligase (GDP-forming), alpha subunit
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 itaconate[c] + 1 coenzyme A[c] + 1 GTP[c] => 1 itaconyl-CoA[c] + 1 GDP[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-10_000030
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: annotation-esiliculosus_genome
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
- LIGAND-RXN:
