Difference between revisions of "Ec-03 005320"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ornithine decar...")
(Created page with "Category:Gene == Gene Ec-03_005320 == * left end position: ** 6378532 * transcription direction: ** POSITIVE * right end position: ** 6387869 * centisome position: ** 97.7...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] ==
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== Gene Ec-03_005320 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6378532
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* common name:
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* transcription direction:
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** Ornithine decarboxylase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.1.1.17 EC-4.1.1.17]
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** 6387869
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* centisome position:
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** 97.70046   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0160_0027
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** Esi0160_0027
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ARYLSULFAT-RXN]]
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** 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PUTRESCINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* With common name(s):
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** 1 L-ornithine[c] '''+''' 1 H+[c] '''=>''' 1 putrescine[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-11_003270]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[ORNDEG-PWY]], superpathway of ornithine degradation: [http://metacyc.org/META/NEW-IMAGE?object=ORNDEG-PWY ORNDEG-PWY]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6378532}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6387869}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
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{{#set: centisome position=97.70046    }}
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* UNIPROT:
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{{#set: common name=Esi_0160_0027|Esi0160_0027}}
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** [http://www.uniprot.org/uniprot/P24169 P24169]
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{{#set: reaction associated=ARYLSULFAT-RXN}}
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** [http://www.uniprot.org/uniprot/P27121 P27121]
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** [http://www.uniprot.org/uniprot/P27116 P27116]
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** [http://www.uniprot.org/uniprot/P27120 P27120]
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** [http://www.uniprot.org/uniprot/P43099 P43099]
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** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
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** [http://www.uniprot.org/uniprot/P08432 P08432]
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** [http://www.uniprot.org/uniprot/P27118 P27118]
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** [http://www.uniprot.org/uniprot/P11926 P11926]
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** [http://www.uniprot.org/uniprot/P14019 P14019]
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** [http://www.uniprot.org/uniprot/P00860 P00860]
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** [http://www.uniprot.org/uniprot/P09057 P09057]
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** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
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** [http://www.uniprot.org/uniprot/P44317 P44317]
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** [http://www.uniprot.org/uniprot/O66940 O66940]
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** [http://www.uniprot.org/uniprot/P27119 P27119]
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** [http://www.uniprot.org/uniprot/P49725 P49725]
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** [http://www.uniprot.org/uniprot/P50134 P50134]
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** [http://www.uniprot.org/uniprot/P93351 P93351]
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** [http://www.uniprot.org/uniprot/P93357 P93357]
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** [http://www.uniprot.org/uniprot/O15696 O15696]
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** [http://www.uniprot.org/uniprot/Q84527 Q84527]
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** [http://www.uniprot.org/uniprot/P41931 P41931]
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** [http://www.uniprot.org/uniprot/O69865 O69865]
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** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Ornithine decarboxylase}}
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{{#set: ec number=EC-4.1.1.17}}
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{{#set: gene associated=Ec-11_003270}}
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{{#set: in pathway=ORNDEG-PWY|PWY-6305|PWY-46}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:54, 21 March 2018

Gene Ec-03_005320

  • left end position:
    • 6378532
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6387869
  • centisome position:
    • 97.70046
  • Synonym(s):
    • Esi_0160_0027
    • Esi0160_0027

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_005320&oldid=30191"