Difference between revisions of "2OXOGLUTARATEDEH-RXN"

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(Created page with "Category:Gene == Gene Ec-03_002180 == * left end position: ** 2663850 * transcription direction: ** POSITIVE * right end position: ** 2672990 * centisome position: ** 40.8...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxo...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-03_002180 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN] ==
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* left end position:
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* direction:
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** 2663850
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 2-oxoglutarate dehydrogenase complex
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* right end position:
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** dihydrolipoamide dehydrogenase
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** 2672990
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** 2-oxoglutarate dehydrogenase E1 component
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* centisome position:
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** 40.802395   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0011_0107
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** 2-oxoglutarate dehydrogenation
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** Esi0011_0107
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** α-ketoglutarate oxidative decarboxylation
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[1.5.1.20-RXN]]
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* With identifiers:
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** 1 [[NAD]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
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* With common name(s):
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** 1 NAD+[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 CO2[c] '''+''' 1 NADH[c] '''+''' 1 succinyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-21_002300]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-25_000020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-27_004160]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-2201]]
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* [[1CMET2-PWY]]
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* [[CODH-PWY]]
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* [[PWY-3841]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=2663850}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27786 27786]
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{{#set: right end position=2672990}}
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* LIGAND-RXN:
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{{#set: centisome position=40.802395    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
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{{#set: common name=Esi_0011_0107|Esi0011_0107}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=1.5.1.20-RXN}}
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{{#set: common name=2-oxoglutarate dehydrogenase complex}}
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{{#set: pathway associated=PWY-2201|1CMET2-PWY|CODH-PWY|PWY-3841}}
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{{#set: common name=dihydrolipoamide dehydrogenase}}
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{{#set: common name=2-oxoglutarate dehydrogenase E1 component}}
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{{#set: common name=2-oxoglutarate dehydrogenation|α-ketoglutarate oxidative decarboxylation}}
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{{#set: gene associated=Ec-21_002300|Ec-25_000020|Ec-27_004160}}
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{{#set: in pathway=PWY-7254|TCA|PWY-5690}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:56, 21 March 2018

Reaction 2OXOGLUTARATEDEH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-oxoglutarate dehydrogenase complex
    • dihydrolipoamide dehydrogenase
    • 2-oxoglutarate dehydrogenase E1 component
  • Synonym(s):
    • 2-oxoglutarate dehydrogenation
    • α-ketoglutarate oxidative decarboxylation

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7254, TCA cycle VII (acetate-producers): PWY-7254
    • 7 reactions found over 9 reactions in the full pathway
  • TCA, TCA cycle I (prokaryotic): TCA
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-5690, TCA cycle II (plants and fungi): PWY-5690
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=2OXOGLUTARATEDEH-RXN&oldid=30436"