Difference between revisions of "6.3.5.7-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Carbon-nitr...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.7-RXN 6.3.5.7-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.7-RXN 6.3.5.7-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Carbon-nitrogen hydrolase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.5.1 EC-6.3.5.1]
+
** [http://enzyme.expasy.org/EC/6.3.5.7 EC-6.3.5.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLN]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-glutamyl-tRNAGln]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[Charged-GLN-tRNAs]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-glutamine[c] '''+''' 1 nicotinate adenine dinucleotide[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 NAD+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 L-glutamate[c]
+
** 1 H2O[c] '''+''' 1 L-glutamine[c] '''+''' 1 ATP[c] '''+''' 1 an L-glutamyl-[tRNAGln][c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 L-glutamate[c] '''+''' 1 an L-glutaminyl-[tRNAgln][c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* Gene: [[Ec-14_000810]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
+
* [[PWY-5921]], glutaminyl-tRNAgln biosynthesis via transamidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5921 PWY-5921]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
+
−
** '''5''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-7761]], NAD salvage pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
Line 41: Line 23:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24384 24384]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17521 17521]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03905 R03905]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0]
+
−
** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7]
+
−
** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4]
+
−
** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Carbon-nitrogen hydrolase}}
+
{{#set: ec number=EC-6.3.5.7}}
−
{{#set: ec number=EC-6.3.5.1}}
+
{{#set: in pathway=PWY-5921}}
−
{{#set: gene associated=Ec-14_000810}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: in pathway=PYRIDNUCSAL-PWY|PWY-5653|PYRIDNUCSYN-PWY|PWY-5381|PWY-7761}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:57, 21 March 2018

Reaction 6.3.5.7-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-glutamine[c] + 1 ATP[c] + 1 an L-glutamyl-[tRNAGln][c] => 1 phosphate[c] + 1 ADP[c] + 1 L-glutamate[c] + 1 an L-glutaminyl-[tRNAgln][c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-5921, glutaminyl-tRNAgln biosynthesis via transamidation: PWY-5921
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=6.3.5.7-RXN&oldid=30495"