Difference between revisions of "PHOSPHORIBULOKINASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-26_000990 == * left end position: ** 1361535 * transcription direction: ** POSITIVE * right end position: ** 1365048 * centisome position: ** 20.6...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] == * direction: ** REVERSIBLE * common name: ** Ph...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-26_000990 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBULOKINASE-RXN PHOSPHORIBULOKINASE-RXN] ==
−
* left end position:
+
* direction:
−
** 1361535
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** Phosphoribulokinase/uridine kinase
−
* right end position:
+
** P-loop containing nucleoside triphosphate hydrolase
−
** 1365048
+
* ec number:
−
* centisome position:
+
** [http://enzyme.expasy.org/EC/2.7.1.19 EC-2.7.1.19]
−
** 20.6815   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0451_0019
 
−
** Esi0451_0019
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
+
* With identifiers:
 +
** 1 [[ATP]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''<=>''' 1 [[D-RIBULOSE-15-P2]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
 +
* With common name(s):
 +
** 1 ATP[c] '''+''' 1 D-ribulose 5-phosphate[c] '''<=>''' 1 D-ribulose-1,5-bisphosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-27_003910]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: automated-name-match
+
*** Assignment: EC-NUMBER
−
* Reaction: [[RXN-7253]]
+
** Source: [[orthology-aragem]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-26_002450]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: automated-name-match
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Reaction: [[RXN0-5408]]
+
== Pathways  ==
 +
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
 +
** '''13''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: automated-name-match
+
*** Tool: [[pathwaytools]]
−
== Pathways associated ==
+
−
* [[PWY-4702]]
+
−
* [[PWY-2301]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=1361535}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19365 19365]
−
{{#set: right end position=1365048}}
+
* LIGAND-RXN:
−
{{#set: centisome position=20.6815    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01523 R01523]
−
{{#set: common name=Esi_0451_0019|Esi0451_0019}}
+
* UNIPROT:
−
{{#set: reaction associated=MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN|RXN-7253|RXN0-5408}}
+
** [http://www.uniprot.org/uniprot/P23010 P23010]
−
{{#set: pathway associated=PWY-4702|PWY-2301}}
+
** [http://www.uniprot.org/uniprot/P0AEX5 P0AEX5]
 +
** [http://www.uniprot.org/uniprot/P19923 P19923]
 +
** [http://www.uniprot.org/uniprot/P19924 P19924]
 +
** [http://www.uniprot.org/uniprot/P23015 P23015]
 +
** [http://www.uniprot.org/uniprot/P12033 P12033]
 +
** [http://www.uniprot.org/uniprot/Q8GRU9 Q8GRU9]
 +
** [http://www.uniprot.org/uniprot/P09559 P09559]
 +
** [http://www.uniprot.org/uniprot/P25697 P25697]
 +
** [http://www.uniprot.org/uniprot/P93681 P93681]
 +
** [http://www.uniprot.org/uniprot/P19824 P19824]
 +
** [http://www.uniprot.org/uniprot/P27774 P27774]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Phosphoribulokinase/uridine kinase}}
 +
{{#set: common name=P-loop containing nucleoside triphosphate hydrolase}}
 +
{{#set: ec number=EC-2.7.1.19}}
 +
{{#set: gene associated=Ec-27_003910|Ec-26_002450}}
 +
{{#set: in pathway=CALVIN-PWY|PWY-5723}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:57, 21 March 2018

Reaction PHOSPHORIBULOKINASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoribulokinase/uridine kinase
    • P-loop containing nucleoside triphosphate hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 D-ribulose 5-phosphate[c] <=> 1 D-ribulose-1,5-bisphosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
    • 13 reactions found over 13 reactions in the full pathway
  • PWY-5723, Rubisco shunt: PWY-5723
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PHOSPHORIBULOKINASE-RXN&oldid=30531"