Difference between revisions of "METHIONINE-DEG1-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] == * direction: ** LEFT-TO-RIGHT * common name: ** lycopene beta cyclase * ec...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-150 RXN1F-150] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=METHIONINE-DEG1-PWY METHIONINE-DEG1-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
−
** lycopene beta cyclase
+
** L-methionine degradation I (to L-homocysteine)
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/5.5.1.19 EC-5.5.1.19]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-126]][c]
+
* [[ADENOSYLHOMOCYSTEINASE-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 all-trans-lycopene[c] '''=>''' 1 γ-carotene[c]
+
*** [[Ec-22_002610]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-aragem]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[S-ADENMETSYN-RXN]]
−
* [[Ec-07_007260]]
+
** 1 associated gene(s):
−
** [[pantograph]]-[[aragem]]
+
*** [[Ec-06_008470]]
−
* [[Ec-00_005850]]
+
** 2 reconstruction source(s) associated:
−
** [[pantograph]]-[[aragem]]
+
*** [[annotation-esiliculosus_genome]]
−
* [[Ec-24_002150]]
+
*** [[orthology-aragem]]
−
** [[pantograph]]-[[aragem]]
+
== Reaction(s) not found ==
−
* [[Ec-02_005510]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7605 RXN-7605]
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-24_002140]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-00_005820]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-10_006240]]
+
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways  ==
+
−
* [[PWY-5943]], β-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5943 PWY-5943]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-7591]], okenone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7591 PWY-7591]
+
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2157}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32222 32222]
+
{{#set: taxonomic range=TAX-2}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05341 R05341]
+
{{#set: common name=L-methionine degradation I (to L-homocysteine)}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction found=2}}
−
{{#set: common name=lycopene beta cyclase}}
+
{{#set: total reaction=3}}
−
{{#set: ec number=EC-5.5.1.19}}
+
{{#set: completion rate=67.0}}
−
{{#set: gene associated=Ec-07_007260|Ec-00_005850|Ec-24_002150|Ec-02_005510|Ec-24_002140|Ec-00_005820|Ec-10_006240}}
+
−
{{#set: in pathway=PWY-5943|PWY-7591}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:55, 17 March 2018

Pathway METHIONINE-DEG1-PWY

  • taxonomic range:
  • common name:
    • L-methionine degradation I (to L-homocysteine)
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=METHIONINE-DEG1-PWY&oldid=10903"