Difference between revisions of "UDPKIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CADAVERINE CADAVERINE] == * smiles: ** C([N+])CCCC[N+] * inchi key: ** InChIKey=VHRGRCVQAFMJIZ-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside diphosphate ki...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CADAVERINE CADAVERINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPKIN-RXN UDPKIN-RXN] ==
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* smiles:
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* direction:
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** C([N+])CCCC[N+]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VHRGRCVQAFMJIZ-UHFFFAOYSA-P
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* common name:
 
* common name:
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** cadaverine
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** nucleoside diphosphate kinase
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* molecular weight:
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** Nucleoside diphosphate kinase
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** 104.195   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
 
* Synonym(s):
 
* Synonym(s):
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** diaminopentane
 
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** 1,5-Diaminopentane
 
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** 1,5-pentanediamine
 
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** pentamethylenediamine
 
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** BioDex 1-
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN0-5217]]
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* With identifiers:
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* [[RXN-11784]]
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** 1 [[UDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[UTP]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 UDP[c] '''+''' 1 ATP[c] '''=>''' 1 UTP[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-07_000140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-26_003930]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_004330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-04_001140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-22_003280]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-03_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_005170]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 462-94-2
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25098 25098]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=3718401 3718401]
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* LIGAND-RXN:
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* HMDB : HMDB02322
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** [http://www.genome.jp/dbget-bin/www_bget?R00156 R00156]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01672 C01672]
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{{#set: common name=nucleoside diphosphate kinase}}
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* CHEMSPIDER:
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{{#set: common name=Nucleoside diphosphate kinase}}
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** [http://www.chemspider.com/Chemical-Structure.2949420.html 2949420]
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{{#set: ec number=EC-2.7.4.6}}
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* CHEBI:
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{{#set: gene associated=Ec-07_000140|Ec-26_003930|Ec-11_004330|Ec-04_001140|Ec-22_003280|Ec-03_001380|Ec-11_005170}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58384 58384]
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{{#set: in pathway=PWY-7176}}
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* BIGG : 38125
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: smiles=C([N+])CCCC[N+]}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: inchi key=InChIKey=VHRGRCVQAFMJIZ-UHFFFAOYSA-P}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=cadaverine}}
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{{#set: molecular weight=104.195    }}
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{{#set: common name=diaminopentane|1,5-Diaminopentane|1,5-pentanediamine|pentamethylenediamine|BioDex 1-}}
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{{#set: consumed by=RXN0-5217|RXN-11784}}
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Latest revision as of 19:57, 21 March 2018

Reaction UDPKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • nucleoside diphosphate kinase
    • Nucleoside diphosphate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP[c] + 1 ATP[c] => 1 UTP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7176, UTP and CTP de novo biosynthesis: PWY-7176
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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