Difference between revisions of "Ec-14 005710"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-477 RXN66-477] == * direction: ** LEFT-TO-RIGHT * common name: ** straight chain fatty acyl-C...")
(Created page with "Category:Gene == Gene Ec-14_005710 == * left end position: ** 5302187 * transcription direction: ** NEGATIVE * right end position: ** 5313032 * centisome position: ** 80.8...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-477 RXN66-477] ==
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== Gene Ec-14_005710 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5302187
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* common name:
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* transcription direction:
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** straight chain fatty acyl-CoA ligase
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** NEGATIVE
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** long chain acyl-coA synthetase
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* right end position:
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** long chain acyl-CoA synthetase
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** 5313032
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 80.820755   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0512_0001
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** Esi0512_0001
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** RDR2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RNA-DIRECTED-RNA-POLYMERASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[Odd-Straight-Chain-234-Sat-FA]][c] '''=>''' 1 [[Odd-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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* With common name(s):
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 an odd numbered straight chain 2,3,4-saturated fatty acid[c] '''=>''' 1 an odd numbered straight chain 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-01_001560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-02_006430]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY66-388]], fatty acid α-oxidation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-388 PWY66-388]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=5302187}}
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{{#set: common name=straight chain fatty acyl-CoA ligase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: right end position=5313032}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: centisome position=80.820755    }}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Esi_0512_0001|Esi0512_0001|RDR2}}
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{{#set: gene associated=Ec-01_001560|Ec-03_003710|Ec-12_008720|Ec-02_006430}}
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{{#set: reaction associated=RNA-DIRECTED-RNA-POLYMERASE-RXN}}
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{{#set: in pathway=PWY66-388}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:58, 21 March 2018

Gene Ec-14_005710

  • left end position:
    • 5302187
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5313032
  • centisome position:
    • 80.820755
  • Synonym(s):
    • Esi_0512_0001
    • Esi0512_0001
    • RDR2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_005710&oldid=30617"