Difference between revisions of "RIB5PISOM-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=23S-rRNA-pseudouridine955-2504-2580 23S-rRNA-pseudouridine955-2504-2580] == * common name: ** a...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3,4-d...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=23S-rRNA-pseudouridine955-2504-2580 23S-rRNA-pseudouridine955-2504-2580] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIOHBUTANONEPSYN-RXN DIOHBUTANONEPSYN-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** a pseudouridine955/2504/2580 in 23S rRNA
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** 3,4-dihydroxy-2-butanone-4-phosphate synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.99.12 EC-4.1.99.12]
 
* Synonym(s):
 
* Synonym(s):
** a 23S rRNA pseudouridine955/2504/2580
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
== Reaction(s) known to produce the compound ==
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* With identifiers:
* [[RXN-11838]]
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** 1 [[RIBULOSE-5P]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c]
== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 D-ribulose 5-phosphate[c] '''=>''' 1 formate[c] '''+''' 1 H+[c] '''+''' 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-27_004040]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
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** '''4''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: common name=a pseudouridine955/2504/2580 in 23S rRNA}}
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* RHEA:
{{#set: common name=a 23S rRNA pseudouridine955/2504/2580}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18457 18457]
{{#set: produced by=RXN-11838}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07281 R07281]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=3,4-dihydroxy-2-butanone-4-phosphate synthase}}
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{{#set: ec number=EC-4.1.99.12}}
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{{#set: gene associated=Ec-27_004040}}
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{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 20:56, 17 March 2018

Reaction DIOHBUTANONEPSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3,4-dihydroxy-2-butanone-4-phosphate synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6167, flavin biosynthesis II (archaea): PWY-6167
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links