Difference between revisions of "Ec-01 006330"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.39-RXN 1.1.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** malate dehydrogenase...")
 
(Created page with "Category:Gene == Gene Ec-14_000190 == * left end position: ** 120654 * transcription direction: ** POSITIVE * right end position: ** 126996 * centisome position: ** 1.8391...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.39-RXN 1.1.1.39-RXN] ==
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== Gene Ec-14_000190 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 120654
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* common name:
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* transcription direction:
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** malate dehydrogenase (decarboxylating) (NAD+)
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** POSITIVE
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** Malic oxidoreductase
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* right end position:
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* ec number:
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** 126996
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** [http://enzyme.expasy.org/EC/1.1.1.38 EC-1.1.1.38]
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.39 EC-1.1.1.39]
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** 1.8391179   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0029_0027
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** Esi0029_0027
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[4.2.2.10-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[MAL]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** esiliculosus_genome
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* With common name(s):
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***automated-name-match
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** 1 NAD+[c] '''+''' 1 (S)-malate[c] '''=>''' 1 NADH[c] '''+''' 1 pyruvate[c] '''+''' 1 CO2[c]
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* [[RXN-14897]]
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** esiliculosus_genome
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-07_002060]]
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* [[PWY-7243]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-01_003680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_002070]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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* [[PWY-3641]], L-carnitine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3641 PWY-3641]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
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** '''6''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7686]], L-malate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7686 PWY-7686]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=120654}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12653 12653]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=126996}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00214 R00214]
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{{#set: centisome position=1.8391179    }}
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* UNIPROT:
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{{#set: common name=Esi_0029_0027|Esi0029_0027}}
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** [http://www.uniprot.org/uniprot/Q48662 Q48662]
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{{#set: reaction associated=4.2.2.10-RXN|RXN-14897}}
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** [http://www.uniprot.org/uniprot/Q9PN12 Q9PN12]
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{{#set: pathway associated=PWY-7243}}
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** [http://www.uniprot.org/uniprot/O59029 O59029]
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** [http://www.uniprot.org/uniprot/P16468 P16468]
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** [http://www.uniprot.org/uniprot/Q9CGB2 Q9CGB2]
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** [http://www.uniprot.org/uniprot/P26616 P26616]
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** [http://www.uniprot.org/uniprot/Q9JVE6 Q9JVE6]
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** [http://www.uniprot.org/uniprot/P37224 P37224]
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** [http://www.uniprot.org/uniprot/P37225 P37225]
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** [http://www.uniprot.org/uniprot/P37221 P37221]
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** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9]
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** [http://www.uniprot.org/uniprot/Q9M162 Q9M162]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=malate dehydrogenase (decarboxylating) (NAD+)}}
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{{#set: common name=Malic oxidoreductase}}
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{{#set: ec number=EC-1.1.1.38}}
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{{#set: ec number=EC-1.1.1.39}}
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{{#set: gene associated=Ec-07_002060|Ec-01_003680|Ec-07_002070}}
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{{#set: in pathway=PWY-3641|GLUCONEO-PWY|PWY-7384|PWY-7686|PWY-7115|PWY-7118}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:25, 17 March 2018

Gene Ec-14_000190

  • left end position:
    • 120654
  • transcription direction:
    • POSITIVE
  • right end position:
    • 126996
  • centisome position:
    • 1.8391179
  • Synonym(s):
    • Esi_0029_0027
    • Esi0029_0027

Reactions associated

  • 4.2.2.10-RXN
    • esiliculosus_genome
      • automated-name-match
  • RXN-14897
    • esiliculosus_genome
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_006330&oldid=8850"