Difference between revisions of "Ec-19 001750"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PLASMENYLCHOLINE PLASMENYLCHOLINE] == * common name: ** a plasmenylcholine * Synonym(s): ** an...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == * direction: ** LEFT-TO-RIG...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PLASMENYLCHOLINE PLASMENYLCHOLINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a plasmenylcholine
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** pseudouridine synthase
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** Pseudouridine synthase I, TruA, C-terminal
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* ec number:
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** [http://enzyme.expasy.org/EC/5.4.99.12 EC-5.4.99.12]
 
* Synonym(s):
 
* Synonym(s):
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** an O-1-Z-alk-1-enyl-2-acyl-sn-glycero-3-phosphocholine
 
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** a choline plasmalogen
 
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** a 1-Z-alkenyl-2-acylglycerophosphocholine
 
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** a 1-Z-alkenyl-2-acyl-sn-glycero-3-phosphocholine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-17736]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[tRNA-uridine-38-40]][c] '''=>''' 1 [[tRNA-pseudouridine-38-40]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a uridine38-40 in tRNA[c] '''=>''' 1 a pseudouridine38-40 in tRNA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-05_002890]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-09_003890]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-21_005910]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_000160]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001340]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-19_003680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_001350]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-22_001870]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-20_000700]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-08_003150]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_004410]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-14_001540]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_004490]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_000690]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-28_003620]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-20_003420]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_000310]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_003220]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-17_003530]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-01_008790]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-26_004180]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_006750]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_005240]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-04_001540]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-06_009680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
 +
== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a plasmenylcholine}}
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* LIGAND-RXN:
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{{#set: common name=an O-1-Z-alk-1-enyl-2-acyl-sn-glycero-3-phosphocholine|a choline plasmalogen|a 1-Z-alkenyl-2-acylglycerophosphocholine|a 1-Z-alkenyl-2-acyl-sn-glycero-3-phosphocholine}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03020 R03020]
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{{#set: consumed by=RXN-17736}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q59069 Q59069]
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** [http://www.uniprot.org/uniprot/P47428 P47428]
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** [http://www.uniprot.org/uniprot/P45291 P45291]
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** [http://www.uniprot.org/uniprot/Q45557 Q45557]
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** [http://www.uniprot.org/uniprot/Q50291 Q50291]
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** [http://www.uniprot.org/uniprot/P53167 P53167]
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** [http://www.uniprot.org/uniprot/Q12211 Q12211]
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** [http://www.uniprot.org/uniprot/P73295 P73295]
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** [http://www.uniprot.org/uniprot/P07649 P07649]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pseudouridine synthase}}
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{{#set: common name=Pseudouridine synthase I, TruA, C-terminal}}
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{{#set: ec number=EC-5.4.99.12}}
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{{#set: gene associated=Ec-05_002890|Ec-09_003890|Ec-21_005910|Ec-14_000160|Ec-14_001340|Ec-19_003680|Ec-14_001350|Ec-22_001870|Ec-20_000700|Ec-08_003150|Ec-27_004410|Ec-14_001540|Ec-06_004490|Ec-01_000690|Ec-28_003620|Ec-20_003420|Ec-07_000310|Ec-06_003220|Ec-17_003530|Ec-01_008790|Ec-26_004180|Ec-07_006750|Ec-27_005240|Ec-04_001540|Ec-06_009680}}
 +
{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 20:59, 17 March 2018

Reaction TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pseudouridine synthase
    • Pseudouridine synthase I, TruA, C-terminal
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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