Difference between revisions of "PWY-3581"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Asparaginase/glut...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12178 RXN-12178] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycosyl hydrolase, family...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12178 RXN-12178] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Asparaginase/glutaminase
+
** Glycosyl hydrolase, family 88
−
** Peptidase T2, asparaginase 2
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
+
** [http://enzyme.expasy.org/EC/3.2.1.179 EC-3.2.1.179]
−
** [http://enzyme.expasy.org/EC/3.5.1.1 EC-3.5.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ASN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ASPARTATE]][c]
+
** 1 [[CPD-36]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-acetyl-D-galactosamine]][c] '''+''' 1 [[CPD-13122]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-asparagine[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 L-aspartate[c]
+
** 1 4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine[c] '''+''' 1 H2O[c] '''=>''' 1 N-acetyl-D-galactosamine[c] '''+''' 1 4-deoxy-L-threo-hex-4-enopyranuronate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-27_003980]]
+
* [[Ec-02_002980]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***EC-NUMBER
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***AUTOMATED-NAME-MATCH
−
* [[Ec-11_002360]]
+
* [[Ec-02_002970]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPASN-PWY ASPASN-PWY]
+
* [[PWY-7646]], dermatan sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7646 PWY-7646]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1]
+
* [[PWY-6572]], chondroitin sulfate degradation I (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6572 PWY-6572]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21016 21016]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31654 31654]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P06608 P06608]
+
−
** [http://www.uniprot.org/uniprot/P26900 P26900]
+
−
** [http://www.uniprot.org/uniprot/P43843 P43843]
+
−
** [http://www.uniprot.org/uniprot/Q9V262 Q9V262]
+
−
** [http://www.uniprot.org/uniprot/Q9JT73 Q9JT73]
+
−
** [http://www.uniprot.org/uniprot/O25424 O25424]
+
−
** [http://www.uniprot.org/uniprot/P37595 P37595]
+
−
** [http://www.uniprot.org/uniprot/Q9ZLB9 Q9ZLB9]
+
−
** [http://www.uniprot.org/uniprot/O34482 O34482]
+
−
** [http://www.uniprot.org/uniprot/Q9V2K1 Q9V2K1]
+
−
** [http://www.uniprot.org/uniprot/O57797 O57797]
+
−
** [http://www.uniprot.org/uniprot/Q9PJ82 Q9PJ82]
+
−
** [http://www.uniprot.org/uniprot/P30363 P30363]
+
−
** [http://www.uniprot.org/uniprot/P30362 P30362]
+
−
** [http://www.uniprot.org/uniprot/P30364 P30364]
+
−
** [http://www.uniprot.org/uniprot/P38986 P38986]
+
−
** [http://www.uniprot.org/uniprot/P50287 P50287]
+
−
** [http://www.uniprot.org/uniprot/P11163 P11163]
+
−
** [http://www.uniprot.org/uniprot/P50286 P50286]
+
−
** [http://www.uniprot.org/uniprot/P87015 P87015]
+
−
** [http://www.uniprot.org/uniprot/Q9UTS7 Q9UTS7]
+
−
** [http://www.uniprot.org/uniprot/P00805 P00805]
+
−
** [http://www.uniprot.org/uniprot/P0A962 P0A962]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Asparaginase/glutaminase}}
+
{{#set: common name=Glycosyl hydrolase, family 88}}
−
{{#set: common name=Peptidase T2, asparaginase 2}}
+
{{#set: ec number=EC-3.2.1.179}}
−
{{#set: ec number=EC-3.5.1.38}}
+
{{#set: gene associated=Ec-02_002980|Ec-02_002970}}
−
{{#set: ec number=EC-3.5.1.1}}
+
{{#set: in pathway=PWY-7646|PWY-6572}}
−
{{#set: gene associated=Ec-27_003980|Ec-11_002360}}
+
−
{{#set: in pathway=ASPASN-PWY|ASPARAGINE-DEG1-PWY-1|ASPARAGINE-DEG1-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:03, 17 March 2018

Reaction RXN-12178

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycosyl hydrolase, family 88
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 4-deoxy-β-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine[c] + 1 H2O[c] => 1 N-acetyl-D-galactosamine[c] + 1 4-deoxy-L-threo-hex-4-enopyranuronate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7646, dermatan sulfate degradation I (bacterial): PWY-7646
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6572, chondroitin sulfate degradation I (bacterial): PWY-6572
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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