Difference between revisions of "Ec-11 004190"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] == * direction: ** LEFT-TO-RIGHT * common name: ** (2E)-5-methylhexa-2,4-dieno...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRODIPICSYN-RXN DIHYDRODIPICSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11919 RXN-11919] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** (2E)-5-methylhexa-2,4-dienoyl-CoA hydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.3.3.7 EC-4.3.3.7]
+
** [http://enzyme.expasy.org/EC/4.2.1 EC-4.2.1]
 
* Synonym(s):
 
* Synonym(s):
−
** dihydropicolinate synthetase
 
−
** dihydrodipicolinic acid synthase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14443]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-12904]][c] '''=>''' 1 [[CPD-12905]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 pyruvate[c] '''+''' 1 L-aspartate-semialdehyde[c] '''=>''' 1 H2O[c] '''+''' 1 H+[c] '''+''' 1 (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate[c]
+
** 1 H2O[c] '''+''' 1 (2E)-5-methylhexa-2,4-dienoyl-CoA[c] '''=>''' 1 3-hydroxy-5-methylhex-4-enoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-17_000320]]
 +
** [[pantograph]]-[[aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
+
* [[PWY-6672]], cis-genanyl-CoA degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6672 PWY-6672]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
+
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-aragem]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08093 R08093]
−
** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P43797 P43797]
+
−
** [http://www.uniprot.org/uniprot/O26892 O26892]
+
−
** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
+
−
** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
+
−
** [http://www.uniprot.org/uniprot/P19808 P19808]
+
−
** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
+
−
** [http://www.uniprot.org/uniprot/O05969 O05969]
+
−
** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
+
−
** [http://www.uniprot.org/uniprot/Q04796 Q04796]
+
−
** [http://www.uniprot.org/uniprot/Q57695 Q57695]
+
−
** [http://www.uniprot.org/uniprot/O25657 O25657]
+
−
** [http://www.uniprot.org/uniprot/O67216 O67216]
+
−
** [http://www.uniprot.org/uniprot/O29352 O29352]
+
−
** [http://www.uniprot.org/uniprot/O84366 O84366]
+
−
** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
+
−
** [http://www.uniprot.org/uniprot/P63945 P63945]
+
−
** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
+
−
** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
+
−
** [http://www.uniprot.org/uniprot/Q43038 Q43038]
+
−
** [http://www.uniprot.org/uniprot/P49423 P49423]
+
−
** [http://www.uniprot.org/uniprot/Q55513 Q55513]
+
−
** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
+
−
** [http://www.uniprot.org/uniprot/Q42948 Q42948]
+
−
** [http://www.uniprot.org/uniprot/Q42940 Q42940]
+
−
** [http://www.uniprot.org/uniprot/O86841 O86841]
+
−
** [http://www.uniprot.org/uniprot/P24847 P24847]
+
−
** [http://www.uniprot.org/uniprot/P24846 P24846]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.3.3.7}}
+
{{#set: common name=(2E)-5-methylhexa-2,4-dienoyl-CoA hydratase}}
−
{{#set: common name=dihydropicolinate synthetase|dihydrodipicolinic acid synthase}}
+
{{#set: ec number=EC-4.2.1}}
−
{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
+
{{#set: gene associated=Ec-17_000320}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=PWY-6672}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 20:27, 17 March 2018

Reaction RXN-11919

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • (2E)-5-methylhexa-2,4-dienoyl-CoA hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (2E)-5-methylhexa-2,4-dienoyl-CoA[c] => 1 3-hydroxy-5-methylhex-4-enoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6672, cis-genanyl-CoA degradation: PWY-6672
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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