Difference between revisions of "PWY-7206"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine-phosphate ox...")
 
(Created page with "Category:Gene == Gene Ec-16_002160 == * left end position: ** 2359865 * transcription direction: ** POSITIVE * right end position: ** 2366190 * centisome position: ** 44.2...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] ==
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== Gene Ec-16_002160 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2359865
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* common name:
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* transcription direction:
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** pyridoxamine-phosphate oxidase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
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** 2366190
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* centisome position:
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** 44.211655   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0047_0048
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** Esi0047_0048
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** Taz1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[2.3.1.23-RXN]]
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** 1 [[PYRIDOXAMINE-5P]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c]
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** esiliculosus_genome
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* With common name(s):
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***automated-name-match
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** 1 pyridoxamine 5'-phosphate[c] '''+''' 1 oxygen[c] '''+''' 1 H2O[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 ammonium[c] '''+''' 1 pyridoxal 5'-phosphate[c]
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* [[RXN-15036]]
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** esiliculosus_genome
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-15066]]
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* [[Ec-10_006030]]
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** esiliculosus_genome
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** ESILICULOSUS_GENOME
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***automated-name-match
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***GO-TERM
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* [[RXN-16041]]
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* [[Ec-01_000340]]
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** esiliculosus_genome
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** ESILICULOSUS_GENOME
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***automated-name-match
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***GO-TERM
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* [[RXN-16042]]
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* [[Ec-09_002030]]
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** esiliculosus_genome
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** ESILICULOSUS_GENOME
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***automated-name-match
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***GO-TERM
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* [[RXN-16043]]
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== Pathways ==
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** esiliculosus_genome
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* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
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***automated-name-match
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[RXN-16044]]
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* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
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** esiliculosus_genome
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** '''5''' reactions found over '''5''' reactions in the full pathway
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***automated-name-match
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== Reconstruction information  ==
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* [[RXN-16045]]
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* [[annotation]]:
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** esiliculosus_genome
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** [[pathwaytools]]:
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***automated-name-match
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*** [[esiliculosus_genome]]
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* [[RXN-16150]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16151]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16152]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16157]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-16158]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-17688]]
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** esiliculosus_genome
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***automated-name-match
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* [[RXN-9670]]
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** esiliculosus_genome
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***automated-name-match
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== Pathways associated ==
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* [[PWY-7053]]
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* [[PWY-5353]]
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* [[PWY-6433]]
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* [[PWY-5368]]
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* [[PWY-5995]]
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* [[PWY-7470]]
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* [[PWY-7416]]
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* [[PWY-7409]]
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* [[PWY-6803]]
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* [[PWY-6958]]
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* [[PWY-7618]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2359865}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15817 15817]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2366190}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277]
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{{#set: centisome position=44.211655    }}
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* UNIPROT:
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{{#set: common name=Esi_0047_0048|Esi0047_0048|Taz1}}
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** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7]
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{{#set: reaction associated=2.3.1.23-RXN|RXN-15036|RXN-15066|RXN-16041|RXN-16042|RXN-16043|RXN-16044|RXN-16045|RXN-16150|RXN-16151|RXN-16152|RXN-16157|RXN-16158|RXN-17688|RXN-9670}}
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** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1]
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{{#set: pathway associated=PWY-7053|PWY-5353|PWY-6433|PWY-5368|PWY-5995|PWY-7470|PWY-7416|PWY-7409|PWY-6803|PWY-6958|PWY-7618}}
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** [http://www.uniprot.org/uniprot/P44909 P44909]
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** [http://www.uniprot.org/uniprot/P38075 P38075]
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** [http://www.uniprot.org/uniprot/P74211 P74211]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyridoxamine-phosphate oxidase}}
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{{#set: ec number=EC-1.4.3.5}}
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{{#set: gene associated=Ec-10_006030|Ec-01_000340|Ec-09_002030}}
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{{#set: in pathway=PWY-7204|PLPSAL-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:17, 17 March 2018

Gene Ec-16_002160

  • left end position:
    • 2359865
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2366190
  • centisome position:
    • 44.211655
  • Synonym(s):
    • Esi_0047_0048
    • Esi0047_0048
    • Taz1

Reactions associated

  • 2.3.1.23-RXN
    • esiliculosus_genome
      • automated-name-match
  • RXN-15036
    • esiliculosus_genome
      • automated-name-match
  • RXN-15066
    • esiliculosus_genome
      • automated-name-match
  • RXN-16041
    • esiliculosus_genome
      • automated-name-match
  • RXN-16042
    • esiliculosus_genome
      • automated-name-match
  • RXN-16043
    • esiliculosus_genome
      • automated-name-match
  • RXN-16044
    • esiliculosus_genome
      • automated-name-match
  • RXN-16045
    • esiliculosus_genome
      • automated-name-match
  • RXN-16150
    • esiliculosus_genome
      • automated-name-match
  • RXN-16151
    • esiliculosus_genome
      • automated-name-match
  • RXN-16152
    • esiliculosus_genome
      • automated-name-match
  • RXN-16157
    • esiliculosus_genome
      • automated-name-match
  • RXN-16158
    • esiliculosus_genome
      • automated-name-match
  • RXN-17688
    • esiliculosus_genome
      • automated-name-match
  • RXN-9670
    • esiliculosus_genome
      • automated-name-match

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7206&oldid=12422"