Difference between revisions of "D-XYLULOSE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] == * direction: ** LEFT-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** DNA photolyase
 +
** deoxyribodipyrimidine photo-lyase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.1.10 EC-3.5.1.10]
+
** [http://enzyme.expasy.org/EC/4.1.99.3 EC-4.1.99.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[DNA-With-Pyrimidine-Dimers]][c] '''=>''' 1 [[DNA-Adjacent-Pyrimidines]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 H2O[c] '''=>''' 1 a tetrahydrofolate[c] '''+''' 1 formate[c] '''+''' 1 H+[c]
+
**
−
 
+
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-10_005990]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-01_008080]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-01_008100]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 +
* [[Ec-16_001260]]
 +
** ESILICULOSUS_GENOME
 +
***GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 
−
** '''4''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 
−
** '''12''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 
−
** '''8''' reactions found over '''24''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19833 19833]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00034 R00034]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P37051 P37051]
+
** [http://www.uniprot.org/uniprot/P12769 P12769]
−
** [http://www.uniprot.org/uniprot/Q03432 Q03432]
+
** [http://www.uniprot.org/uniprot/Q9JSP8 Q9JSP8]
−
** [http://www.uniprot.org/uniprot/Q9PPC9 Q9PPC9]
+
** [http://www.uniprot.org/uniprot/Q9HQ46 Q9HQ46]
−
** [http://www.uniprot.org/uniprot/Q46339 Q46339]
+
** [http://www.uniprot.org/uniprot/P12768 P12768]
−
** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7]
+
** [http://www.uniprot.org/uniprot/P27526 P27526]
 +
** [http://www.uniprot.org/uniprot/P25078 P25078]
 +
** [http://www.uniprot.org/uniprot/Q43125 Q43125]
 +
** [http://www.uniprot.org/uniprot/P40115 P40115]
 +
** [http://www.uniprot.org/uniprot/Q28811 Q28811]
 +
** [http://www.uniprot.org/uniprot/Q24443 Q24443]
 +
** [http://www.uniprot.org/uniprot/Q91186 Q91186]
 +
** [http://www.uniprot.org/uniprot/Q42696 Q42696]
 +
** [http://www.uniprot.org/uniprot/P05066 P05066]
 +
** [http://www.uniprot.org/uniprot/O24020 O24020]
 +
** [http://www.uniprot.org/uniprot/O24374 O24374]
 +
** [http://www.uniprot.org/uniprot/P00914 P00914]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.5.1.10}}
+
{{#set: common name=DNA photolyase}}
−
{{#set: in pathway=P164-PWY|PWY-2201|PWY-5497}}
+
{{#set: common name=deoxyribodipyrimidine photo-lyase}}
 +
{{#set: ec number=EC-4.1.99.3}}
 +
{{#set: gene associated=Ec-10_005990|Ec-01_008080|Ec-01_008100|Ec-16_001260}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 20:27, 17 March 2018

Reaction DEOXYRIBODIPYRIMIDINE-PHOTOLYASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DNA photolyase
    • deoxyribodipyrimidine photo-lyase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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