Difference between revisions of "RXN-17797"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.229-RXN 2.4.1.229-RXN] == * direction: ** REVERSIBLE * common name: ** [Skp1-protein]-hydroxy...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.229-RXN 2.4.1.229-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* common name:
 
* common name:
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** [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60
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** TCA cycle III (animals)
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.1.229 EC-2.4.1.229]
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* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
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** citric acid cycle
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** Szent-Gyorgyi-Krebs cycle
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** Krebs cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''10''' reactions found over '''11''' reactions in the full pathway
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** 1 [[Protein-hydroxyprolines]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c] '''+''' 1 [[CPD-6242]][c]
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* [[2OXOGLUTDECARB-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 a [protein]-trans-4-hydroxy-L-proline[c] '''+''' 1 UDP-N-acetyl-&alpha;-D-glucosamine[c] '''<=>''' 1 H+[c] '''+''' 1 UDP[c] '''+''' 1 a protein-O-(N-acetyl-D-glucosaminyl)-trans-4-hydroxy-L-proline[c]
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*** [[Ec-25_000020]]
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*** [[Ec-27_004160]]
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== Genes associated with this reaction  ==
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*** [[Ec-21_002310]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-21_002300]]
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* [[Ec-01_009040]]
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** 1 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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* [[ACONITATEDEHYDR-RXN]]
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* [[Ec-14_003270]]
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** 2 associated gene(s):
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** ESILICULOSUS_GENOME
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*** [[Ec-16_001000]]
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***EC-NUMBER
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*** [[Ec-12_000170]]
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* [[Ec-12_003420]]
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** 1 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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* [[ACONITATEHYDR-RXN]]
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== Pathways  ==
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** 2 associated gene(s):
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== Reconstruction information  ==
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*** [[Ec-12_000170]]
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* [[annotation]]:
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*** [[Ec-16_001000]]
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** [[pathwaytools]]:
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** 1 reconstruction source(s) associated:
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*** [[esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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* [[CITSYN-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-23_003460]]
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*** [[Ec-25_001360]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_006200]]
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*** [[Ec-02_003100]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[RXN0-1147]]
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** 3 associated gene(s):
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*** [[Ec-21_002300]]
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*** [[Ec-25_000020]]
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*** [[Ec-27_004160]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000030]]
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*** [[Ec-02_001020]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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** 1 associated gene(s):
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*** [[Ec-10_000030]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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** 6 associated gene(s):
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*** [[Ec-07_002870]]
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*** [[Ec-07_007310]]
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*** [[Ec-11_000360]]
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*** [[Ec-21_003470]]
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*** [[Ec-05_003640]]
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*** [[Ec-27_006560]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ISOCITRATE-DEHYDROGENASE-NAD+-RXN ISOCITRATE-DEHYDROGENASE-NAD+-RXN]
 
== External links  ==
 
== External links  ==
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{{#set: direction=REVERSIBLE}}
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{{#set: taxonomic range=TAX-33208}}
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{{#set: common name=[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60}}
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{{#set: common name=TCA cycle III (animals)}}
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{{#set: ec number=EC-2.4.1.229}}
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
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{{#set: gene associated=Ec-01_009040|Ec-14_003270|Ec-12_003420}}
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{{#set: reaction found=10}}
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{{#set: in pathway=}}
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{{#set: total reaction=11}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=91.0}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:21, 17 March 2018

Pathway PWY66-398

  • taxonomic range:
  • common name:
    • TCA cycle III (animals)
  • Synonym(s):
    • tricarboxylic acid cycle
    • citric acid cycle
    • Szent-Gyorgyi-Krebs cycle
    • Krebs cycle

Reaction(s) found

10 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-17797&oldid=12695"