Difference between revisions of "PWY-5670"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN] == * direction: ** L...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7409 PWY-7409] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
−
** Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
+
** phospholipid remodeling (phosphatidylethanolamine, yeast)
−
** SDH1, succinate dehydrogenase subunit 1
+
−
** SDH3, succinate dehydrogenase subunit 3
+
−
** SDH2, succinate dehydrogenase subunit 2
+
−
** SDH4, succinate dehydrogenase subunit 4
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.3.5.1 EC-1.3.5.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''4''' reactions in the full pathway
−
** 1 [[SUC]][c] '''+''' 1 [[Ubiquinones]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[Ubiquinols]][c]
+
* [[RXN-14160]]
−
* With common name(s):
+
** 2 associated gene(s):
−
** 1 succinate[c] '''+''' 1 a ubiquinone[c] '''=>''' 1 fumarate[c] '''+''' 1 an ubiquinol[c]
+
*** [[Ec-23_002410]]
−
 
+
*** [[Ec-23_002720]]
−
== Genes associated with this reaction  ==
+
** 1 reconstruction source(s) associated:
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-esiliculosus_genome]]
−
* [[Ec-11_000360]]
+
* [[RXN-15035]]
−
** ESILICULOSUS_GENOME
+
** 6 associated gene(s):
−
***EC-NUMBER
+
*** [[Ec-12_006930]]
−
* [[Ec-07_002870]]
+
*** [[Ec-04_000440]]
−
** ESILICULOSUS_GENOME
+
*** [[Ec-23_002490]]
−
***EC-NUMBER
+
*** [[Ec-27_004350]]
−
* [[Ec-07_007310]]
+
*** [[Ec-26_002630]]
−
** ESILICULOSUS_GENOME
+
*** [[Ec-24_003890]]
−
***EC-NUMBER
+
** 1 reconstruction source(s) associated:
−
* [[Ec-05_003640]]
+
*** [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
* [[RXN-15036]]
−
***AUTOMATED-NAME-MATCH
+
** 1 associated gene(s):
−
* [[Ec-21_003470]]
+
*** [[Ec-16_002160]]
−
** ESILICULOSUS_GENOME
+
** 1 reconstruction source(s) associated:
−
***EC-NUMBER
+
*** [[annotation-esiliculosus_genome]]
−
* [[Ec-27_006560]]
+
* [[RXN-15067]]
−
** ESILICULOSUS_GENOME
+
** 2 associated gene(s):
−
***AUTOMATED-NAME-MATCH
+
*** [[Ec-04_004650]]
−
== Pathways  ==
+
*** [[Ec-21_005150]]
−
* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
+
** 1 reconstruction source(s) associated:
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
*** [[annotation-esiliculosus_genome]]
−
* [[PWY-4302]], aerobic respiration III (alternative oxidase pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4302 PWY-4302]
+
== Reaction(s) not found ==
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-3781]], aerobic respiration I (cytochrome c): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3781 PWY-3781]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7279]], aerobic respiration II (cytochrome c) (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7279 PWY-7279]
+
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
+
−
** '''11''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY0-1329]], succinate to cytochrome bo oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1329 PWY0-1329]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY0-1353]], succinate to cytochrome bd oxidase electron transfer: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1353 PWY0-1353]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
+
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13713 13713]
+
{{#set: common name=phospholipid remodeling (phosphatidylethanolamine, yeast)}}
−
* LIGAND-RXN:
+
{{#set: reaction found=4}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02164 R02164]
+
{{#set: total reaction=4}}
−
* PIR:
+
{{#set: completion rate=100.0}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T50081 T50081]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46878 T46878]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T41753 T41753]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T37633 T37633]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11245 T11245]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11229 T11229]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11218 T11218]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78180 S78180]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78179 S78179]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78178 S78178]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74810 S74810]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62756 S62756]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62755 S62755]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S59115 S59115]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S59114 S59114]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S56817 S56817]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S34793 S34793]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26978 S26978]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S25968 S25968]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=RDBYIS RDBYIS]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PT0094 PT0094]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0336 JX0336]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I38895 I38895]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D81388 D81388]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D71712 D71712]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D32394 D32394]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=C32394 C32394]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B58930 B58930]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B32394 B32394]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56660 A56660]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A45159 A45159]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A42792 A42792]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P35720 P35720]
+
−
** [http://www.uniprot.org/uniprot/Q26266 Q26266]
+
−
** [http://www.uniprot.org/uniprot/P21913 P21913]
+
−
** [http://www.uniprot.org/uniprot/Q9ZZR2 Q9ZZR2]
+
−
** [http://www.uniprot.org/uniprot/P21911 P21911]
+
−
** [http://www.uniprot.org/uniprot/Q9ZEA1 Q9ZEA1]
+
−
** [http://www.uniprot.org/uniprot/Q9PI67 Q9PI67]
+
−
** [http://www.uniprot.org/uniprot/P21912 P21912]
+
−
** [http://www.uniprot.org/uniprot/P31040 P31040]
+
−
** [http://www.uniprot.org/uniprot/Q9CQA3 Q9CQA3]
+
−
** [http://www.uniprot.org/uniprot/P21801 P21801]
+
−
** [http://www.uniprot.org/uniprot/P35721 P35721]
+
−
** [http://www.uniprot.org/uniprot/P32420 P32420]
+
−
** [http://www.uniprot.org/uniprot/Q00711 Q00711]
+
−
** [http://www.uniprot.org/uniprot/P47052 P47052]
+
−
** [http://www.uniprot.org/uniprot/P48932 P48932]
+
−
** [http://www.uniprot.org/uniprot/P48934 P48934]
+
−
** [http://www.uniprot.org/uniprot/P48935 P48935]
+
−
** [http://www.uniprot.org/uniprot/P48933 P48933]
+
−
** [http://www.uniprot.org/uniprot/P73723 P73723]
+
−
** [http://www.uniprot.org/uniprot/P80481 P80481]
+
−
** [http://www.uniprot.org/uniprot/P80482 P80482]
+
−
** [http://www.uniprot.org/uniprot/P80480 P80480]
+
−
** [http://www.uniprot.org/uniprot/Q9T584 Q9T584]
+
−
** [http://www.uniprot.org/uniprot/P80479 P80479]
+
−
** [http://www.uniprot.org/uniprot/P80478 P80478]
+
−
** [http://www.uniprot.org/uniprot/Q09508 Q09508]
+
−
** [http://www.uniprot.org/uniprot/Q59659 Q59659]
+
−
** [http://www.uniprot.org/uniprot/Q9UTJ7 Q9UTJ7]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain}}
+
−
{{#set: common name=SDH1, succinate dehydrogenase subunit 1}}
+
−
{{#set: common name=SDH3, succinate dehydrogenase subunit 3}}
+
−
{{#set: common name=SDH2, succinate dehydrogenase subunit 2}}
+
−
{{#set: common name=SDH4, succinate dehydrogenase subunit 4}}
+
−
{{#set: ec number=EC-1.3.5.1}}
+
−
{{#set: gene associated=Ec-11_000360|Ec-07_002870|Ec-07_007310|Ec-05_003640|Ec-21_003470|Ec-27_006560}}
+
−
{{#set: in pathway=PWY-561|PWY-4302|PWY-3781|PWY-7279|PWY-6728|PWY0-1329|PWY0-1353|PWY-5690|PWY66-398|TCA}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:24, 17 March 2018

Pathway PWY-7409

  • taxonomic range:
  • common name:
    • phospholipid remodeling (phosphatidylethanolamine, yeast)
  • Synonym(s):

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-5670&oldid=12883"