Difference between revisions of "CPD-11878"

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(Created page with "Category:Gene == Gene Ec-00_010470 == * left end position: ** 17795007 * transcription direction: ** NEGATIVE * right end position: ** 17803917 * centisome position: ** 93...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9839 RXN-9839] == * direction: ** LEFT-TO-RIGHT * common name: ** Mannuronan C-5-epimerase ** M...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-00_010470 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9839 RXN-9839] ==
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* left end position:
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* direction:
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** 17795007
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Mannuronan C-5-epimerase
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* right end position:
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** Mannuronan C-5-epimerase 4
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** 17803917
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/5.1.3.37 EC-5.1.3.37]
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** 93.92274   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0849_0001
 
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** Esi0849_0001
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[3.6.4.4-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[Poly-beta-D-Mannuronate]][c] '''=>''' 1 [[ALGINATE]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 mannuronan[c] '''=>''' 1 alginate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-27_006700]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-24_002750]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-20_004700]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-11_000400]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-08_004820]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-12_000360]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-25_001850]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-06_006700]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-07_000890]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-19_003150]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-09_003950]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=17795007}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Mannuronan C-5-epimerase}}
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{{#set: right end position=17803917}}
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{{#set: common name=Mannuronan C-5-epimerase 4}}
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{{#set: centisome position=93.92274    }}
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{{#set: ec number=EC-5.1.3.37}}
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{{#set: common name=Esi_0849_0001|Esi0849_0001}}
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{{#set: gene associated=Ec-27_006700|Ec-24_002750|Ec-20_004700|Ec-11_000400|Ec-08_004820|Ec-12_000360|Ec-25_001850|Ec-06_006700|Ec-07_000890|Ec-19_003150|Ec-09_003950}}
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{{#set: reaction associated=3.6.4.4-RXN}}
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{{#set: in pathway=PWY-6082|PWY-6073}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 21:25, 17 March 2018

Reaction RXN-9839

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Mannuronan C-5-epimerase
    • Mannuronan C-5-epimerase 4
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6082, alginate biosynthesis II (bacterial): PWY-6082
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6073, alginate biosynthesis I (algal): PWY-6073
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-11878&oldid=12923"