Difference between revisions of "CPD-469"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroli...")
 
(Created page with "Category:Gene == Gene Ec-04_002930 == * left end position: ** 3043784 * transcription direction: ** NEGATIVE * right end position: ** 3050477 * centisome position: ** 46.7...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] ==
+
== Gene Ec-04_002930 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3043784
−
* common name:
+
* transcription direction:
−
** dihydrolipoamide dehydrogenase
+
** NEGATIVE
−
** Oxoglutarate dehydrogenase, N-terminal part
+
* right end position:
−
** 2-oxoglutarate dehydrogenase E1 component
+
** 3050477
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.2.4.2 EC-1.2.4.2]
+
** 46.742226   
 
* Synonym(s):
 
* Synonym(s):
−
** Oxoglutarate decarboxylase
+
** Esi_0201_0019
−
** 2-oxoglutarate decarboxylation
+
** Esi0201_0019
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[PROTEIN-KINASE-RXN]]
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''=>''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** esiliculosus_genome
−
* With common name(s):
+
***go-term
−
** 1 2-oxoglutarate[c] '''+''' 1 H+[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''=>''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-25_000020]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-21_002300]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-27_004160]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-21_002310]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
{{#set: left end position=3043784}}
−
** [http://www.uniprot.org/uniprot/P23129 P23129]
+
{{#set: transcription direction=NEGATIVE}}
−
** [http://www.uniprot.org/uniprot/Q02218 Q02218]
+
{{#set: right end position=3050477}}
−
** [http://www.uniprot.org/uniprot/Q60597 Q60597]
+
{{#set: centisome position=46.742226    }}
−
** [http://www.uniprot.org/uniprot/Q9JRJ8 Q9JRJ8]
+
{{#set: common name=Esi_0201_0019|Esi0201_0019}}
−
** [http://www.uniprot.org/uniprot/P20967 P20967]
+
{{#set: reaction associated=PROTEIN-KINASE-RXN}}
−
** [http://www.uniprot.org/uniprot/P0AFG3 P0AFG3]
+
−
** [http://www.uniprot.org/uniprot/P20707 P20707]
+
−
** [http://www.uniprot.org/uniprot/P51056 P51056]
+
−
** [http://www.uniprot.org/uniprot/Q56600 Q56600]
+
−
** [http://www.uniprot.org/uniprot/O49541 O49541]
+
−
** [http://www.uniprot.org/uniprot/Q59106 Q59106]
+
−
** [http://www.uniprot.org/uniprot/Q9M2T8 Q9M2T8]
+
−
** [http://www.uniprot.org/uniprot/Q9ZRQ2 Q9ZRQ2]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=dihydrolipoamide dehydrogenase}}
+
−
{{#set: common name=Oxoglutarate dehydrogenase, N-terminal part}}
+
−
{{#set: common name=2-oxoglutarate dehydrogenase E1 component}}
+
−
{{#set: ec number=EC-1.2.4.2}}
+
−
{{#set: common name=Oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}}
+
−
{{#set: gene associated=Ec-25_000020|Ec-21_002300|Ec-27_004160|Ec-21_002310}}
+
−
{{#set: in pathway=PWY66-398|PWY-5084}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:27, 17 March 2018

Gene Ec-04_002930

  • left end position:
    • 3043784
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3050477
  • centisome position:
    • 46.742226
  • Synonym(s):
    • Esi_0201_0019
    • Esi0201_0019

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-469&oldid=13090"