Difference between revisions of "Ec-06 009420"

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(Created page with "Category:Gene == Gene Ec-28_003080 == * left end position: ** 2906753 * transcription direction: ** POSITIVE * right end position: ** 2922312 * centisome position: ** 76.7...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** UDP-glucose 4-epim...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-28_003080 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] ==
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* left end position:
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* direction:
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** 2906753
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** UDP-glucose 4-epimerase
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* right end position:
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* ec number:
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** 2922312
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** [http://enzyme.expasy.org/EC/5.1.3.2 EC-5.1.3.2]
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* centisome position:
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** 76.715164   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0009_0115
 
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** Esi0009_0115
 
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** FAE or KCS
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-13322]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[CPD-12575]][c] '''<=>''' 1 [[CPD-14553]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 UDP-&alpha;-D-glucose[c] '''<=>''' 1 UDP-&alpha;-D-galactose[c]
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* [[PWY-6433]]
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 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-04_000280]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-05_006710]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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* [[Ec-04_004180]]
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** [[pantograph]]-[[aragem]]
 +
== Pathways ==
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* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397]
 +
** '''1''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[COLANSYN-PWY]], colanic acid building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY]
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7344]], UDP-D-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7344 PWY-7344]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2906753}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22168 22168]
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{{#set: right end position=2922312}}
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* LIGAND-RXN:
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{{#set: centisome position=76.715164    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00291 R00291]
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{{#set: common name=Esi_0009_0115|Esi0009_0115|FAE or KCS}}
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* UNIPROT:
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{{#set: reaction associated=RXN-13322}}
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** [http://www.uniprot.org/uniprot/P35673 P35673]
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{{#set: pathway associated=PWY-6433}}
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** [http://www.uniprot.org/uniprot/P22715 P22715]
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** [http://www.uniprot.org/uniprot/P21977 P21977]
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** [http://www.uniprot.org/uniprot/P24325 P24325]
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** [http://www.uniprot.org/uniprot/Q9CE66 Q9CE66]
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** [http://www.uniprot.org/uniprot/Q57664 Q57664]
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** [http://www.uniprot.org/uniprot/P55180 P55180]
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** [http://www.uniprot.org/uniprot/Q9PNG3 Q9PNG3]
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** [http://www.uniprot.org/uniprot/P56997 P56997]
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** [http://www.uniprot.org/uniprot/Q59083 Q59083]
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** [http://www.uniprot.org/uniprot/Q44016 Q44016]
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** [http://www.uniprot.org/uniprot/Q45291 Q45291]
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** [http://www.uniprot.org/uniprot/P96995 P96995]
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** [http://www.uniprot.org/uniprot/P45602 P45602]
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** [http://www.uniprot.org/uniprot/P18645 P18645]
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** [http://www.uniprot.org/uniprot/P26503 P26503]
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** [http://www.uniprot.org/uniprot/P40801 P40801]
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** [http://www.uniprot.org/uniprot/Q05026 Q05026]
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** [http://www.uniprot.org/uniprot/P56985 P56985]
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** [http://www.uniprot.org/uniprot/Q51148 Q51148]
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** [http://www.uniprot.org/uniprot/Q56093 Q56093]
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** [http://www.uniprot.org/uniprot/Q42605 Q42605]
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** [http://www.uniprot.org/uniprot/Q60109 Q60109]
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** [http://www.uniprot.org/uniprot/P72903 P72903]
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** [http://www.uniprot.org/uniprot/P72915 P72915]
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** [http://www.uniprot.org/uniprot/O66256 O66256]
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** [http://www.uniprot.org/uniprot/O64749 O64749]
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** [http://www.uniprot.org/uniprot/Q9SN58 Q9SN58]
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** [http://www.uniprot.org/uniprot/Q8VZ26 Q8VZ26]
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** [http://www.uniprot.org/uniprot/Q43070 Q43070]
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** [http://www.uniprot.org/uniprot/Q9T0A7 Q9T0A7]
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** [http://www.uniprot.org/uniprot/O65780 O65780]
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** [http://www.uniprot.org/uniprot/O65781 O65781]
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** [http://www.uniprot.org/uniprot/Q9RMC0 Q9RMC0]
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** [http://www.uniprot.org/uniprot/P04397 P04397]
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** [http://www.uniprot.org/uniprot/P09147 P09147]
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** [http://www.uniprot.org/uniprot/P13226 P13226]
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** [http://www.uniprot.org/uniprot/P09609 P09609]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=UDP-glucose 4-epimerase}}
 +
{{#set: ec number=EC-5.1.3.2}}
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{{#set: gene associated=Ec-04_000280|Ec-05_006710|Ec-04_004180}}
 +
{{#set: in pathway=PWY-3821|PWY-6397|PWY-6317|PWY-6527|PWY-7328|COLANSYN-PWY|PWY66-422|PWY-7344}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 20:29, 17 March 2018

Reaction UDPGLUCEPIM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • UDP-glucose 4-epimerase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-α-D-glucose[c] <=> 1 UDP-α-D-galactose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3821, D-galactose degradation III: PWY-3821
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6397, mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: PWY-6397
    • 1 reactions found over 17 reactions in the full pathway
  • PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6527, stachyose degradation: PWY-6527
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7328, superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: PWY-7328
    • 4 reactions found over 10 reactions in the full pathway
  • COLANSYN-PWY, colanic acid building blocks biosynthesis: COLANSYN-PWY
    • 6 reactions found over 11 reactions in the full pathway
  • PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7344, UDP-D-galactose biosynthesis: PWY-7344
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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