Difference between revisions of "Charged-ASN-tRNAs"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN] == * direction: ** LEFT-TO...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Treha...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSEPHOSPHA-RXN TREHALOSEPHOSPHA-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Pyruvate/Phosphoenolpyruvate kinase-like domain
+
** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
 +
** HAD-like domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.9.1 EC-2.7.9.1]
+
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[TREHALOSE-6P]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[TREHALOSE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 pyruvate[c] '''+''' 1 ATP[c] '''+''' 1 phosphate[c] '''=>''' 1 phosphoenolpyruvate[c] '''+''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 AMP[c]
+
** 1 H2O[c] '''+''' 1 α,α-trehalose 6-phosphate[c] '''=>''' 1 phosphate[c] '''+''' 1 α,α-trehalose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-18_001310]]
+
* [[Ec-24_004390]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
−
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
 
** [[pantograph]]-[[aragem]]
 
** [[pantograph]]-[[aragem]]
 +
* [[Ec-05_002680]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-22_003320]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-20_003980]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-08_005270]]
 +
** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-11_002540]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-06_003140]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[Ec-19_005250]]
 +
** ESILICULOSUS_GENOME
 +
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
+
* [[TREHALOSESYN-PWY]], trehalose biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=TREHALOSESYN-PWY TREHALOSESYN-PWY]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
+
* [[PWY-881]], trehalose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-881 PWY-881]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
+
* [[TRESYN-PWY]], trehalose biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TRESYN-PWY TRESYN-PWY]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10756 10756]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23420 23420]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00206 R00206]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02778 R02778]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06228 R06228]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q7M0I6 Q7M0I6]
+
** [http://www.uniprot.org/uniprot/P31678 P31678]
−
** [http://www.uniprot.org/uniprot/O23404 O23404]
+
** [http://www.uniprot.org/uniprot/P31688 P31688]
−
** [http://www.uniprot.org/uniprot/Q9WYA9 Q9WYA9]
+
** [http://www.uniprot.org/uniprot/Q00786 Q00786]
−
** [http://www.uniprot.org/uniprot/P22983 P22983]
+
** [http://www.uniprot.org/uniprot/P78875 P78875]
−
** [http://www.uniprot.org/uniprot/Q41846 Q41846]
+
** [http://www.uniprot.org/uniprot/O64896 O64896]
−
** [http://www.uniprot.org/uniprot/Q42367 Q42367]
+
** [http://www.uniprot.org/uniprot/O64897 O64897]
−
** [http://www.uniprot.org/uniprot/Q42368 Q42368]
+
−
** [http://www.uniprot.org/uniprot/P22221 P22221]
+
−
** [http://www.uniprot.org/uniprot/P37213 P37213]
+
−
** [http://www.uniprot.org/uniprot/Q42736 Q42736]
+
−
** [http://www.uniprot.org/uniprot/Q42910 Q42910]
+
−
** [http://www.uniprot.org/uniprot/Q39734 Q39734]
+
−
** [http://www.uniprot.org/uniprot/Q39735 Q39735]
+
−
** [http://www.uniprot.org/uniprot/O24612 O24612]
+
−
** [http://www.uniprot.org/uniprot/O85840 O85840]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Pyruvate/Phosphoenolpyruvate kinase-like domain}}
+
{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
−
{{#set: ec number=EC-2.7.9.1}}
+
{{#set: common name=HAD-like domain}}
−
{{#set: gene associated=Ec-18_001310}}
+
{{#set: ec number=EC-3.1.3.12}}
−
{{#set: in pathway=PWY-241|PWY-7115|PWY-7117|PWY-6549}}
+
{{#set: gene associated=Ec-24_004390|Ec-05_002680|Ec-22_003320|Ec-20_003980|Ec-08_005270|Ec-11_002540|Ec-06_003140|Ec-19_005250}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=TREHALOSESYN-PWY|PWY-881|TRESYN-PWY}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=aragem}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Revision as of 21:37, 17 March 2018

Reaction TREHALOSEPHOSPHA-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
    • HAD-like domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 α,α-trehalose 6-phosphate[c] => 1 phosphate[c] + 1 α,α-trehalose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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