Difference between revisions of "RXN-14215"

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(Created page with "Category:Gene == Gene Ec-10_005740 == * left end position: ** 5827987 * transcription direction: ** POSITIVE * right end position: ** 5839354 * centisome position: ** 89.6...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylate kinase...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-10_005740 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] ==
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* left end position:
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* direction:
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** 5827987
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
−
** POSITIVE
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** Adenylate kinase family protein
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* right end position:
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** adenylate kinase
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** 5839354
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** Adenylate kinase/UMP-CMP kinase
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* centisome position:
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** UMP-CMP kinase
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** 89.64775   
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** Alpha-D-phosphohexomutase, C-terminal
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.4.3 EC-2.7.4.3]
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0006_0124
 
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** Esi0006_0124
 
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** Nia
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[NITRATE-REDUCTASE-NADH-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[AMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 2 [[ADP]][c]
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***ec-number
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* With common name(s):
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* [[NITRATE-REDUCTASE-NADPH-RXN]]
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** 1 AMP[c] '''+''' 1 ATP[c] '''=>''' 2 ADP[c]
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** esiliculosus_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[NITRATE-REDUCTASE-NADPORNOPH-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* [[Ec-15_000120]]
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***automated-name-match
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** ESILICULOSUS_GENOME
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[PWY-5675]]
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* [[Ec-06_003080]]
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* [[PWY-381]]
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** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-01_006380]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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* [[Ec-07_003680]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
 +
* [[Ec-00_009240]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-16_005090]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
 +
* [[Ec-14_004920]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-16_004100]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-12_005110]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
 +
== Pathways ==
 +
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5827987}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12973 12973]
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{{#set: right end position=5839354}}
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* LIGAND-RXN:
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{{#set: centisome position=89.64775    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00127 R00127]
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{{#set: common name=Esi_0006_0124|Esi0006_0124|Nia}}
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* UNIPROT:
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{{#set: reaction associated=NITRATE-REDUCTASE-NADH-RXN|NITRATE-REDUCTASE-NADPH-RXN|NITRATE-REDUCTASE-NADPORNOPH-RXN}}
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** [http://www.uniprot.org/uniprot/P05081 P05081]
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{{#set: pathway associated=PWY-5675|PWY-381}}
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** [http://www.uniprot.org/uniprot/P20425 P20425]
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** [http://www.uniprot.org/uniprot/P08166 P08166]
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** [http://www.uniprot.org/uniprot/P38372 P38372]
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** [http://www.uniprot.org/uniprot/O27699 O27699]
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** [http://www.uniprot.org/uniprot/O29581 O29581]
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** [http://www.uniprot.org/uniprot/O59443 O59443]
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** [http://www.uniprot.org/uniprot/Q9YDD2 Q9YDD2]
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** [http://www.uniprot.org/uniprot/Q9UZN1 Q9UZN1]
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** [http://www.uniprot.org/uniprot/P58117 P58117]
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** [http://www.uniprot.org/uniprot/Q9PHM8 Q9PHM8]
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** [http://www.uniprot.org/uniprot/P54819 P54819]
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** [http://www.uniprot.org/uniprot/O66490 O66490]
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** [http://www.uniprot.org/uniprot/Q9V1V9 Q9V1V9]
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** [http://www.uniprot.org/uniprot/P49973 P49973]
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** [http://www.uniprot.org/uniprot/P24323 P24323]
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** [http://www.uniprot.org/uniprot/P47417 P47417]
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** [http://www.uniprot.org/uniprot/Q9HPA7 Q9HPA7]
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** [http://www.uniprot.org/uniprot/P29410 P29410]
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** [http://www.uniprot.org/uniprot/P16304 P16304]
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** [http://www.uniprot.org/uniprot/P00570 P00570]
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** [http://www.uniprot.org/uniprot/P27142 P27142]
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** [http://www.uniprot.org/uniprot/P07170 P07170]
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** [http://www.uniprot.org/uniprot/P12115 P12115]
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** [http://www.uniprot.org/uniprot/P69441 P69441]
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** [http://www.uniprot.org/uniprot/P00568 P00568]
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** [http://www.uniprot.org/uniprot/P10772 P10772]
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** [http://www.uniprot.org/uniprot/P00571 P00571]
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** [http://www.uniprot.org/uniprot/P00569 P00569]
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** [http://www.uniprot.org/uniprot/P10251 P10251]
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** [http://www.uniprot.org/uniprot/P43417 P43417]
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** [http://www.uniprot.org/uniprot/P49974 P49974]
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** [http://www.uniprot.org/uniprot/P33107 P33107]
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** [http://www.uniprot.org/uniprot/P27143 P27143]
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** [http://www.uniprot.org/uniprot/P26364 P26364]
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** [http://www.uniprot.org/uniprot/P33075 P33075]
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** [http://www.uniprot.org/uniprot/P35140 P35140]
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** [http://www.uniprot.org/uniprot/P35141 P35141]
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** [http://www.uniprot.org/uniprot/P39068 P39068]
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** [http://www.uniprot.org/uniprot/P34346 P34346]
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** [http://www.uniprot.org/uniprot/P43188 P43188]
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** [http://www.uniprot.org/uniprot/P69344 P69344]
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** [http://www.uniprot.org/uniprot/P0A0U6 P0A0U6]
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** [http://www.uniprot.org/uniprot/P49979 P49979]
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** [http://www.uniprot.org/uniprot/Q50299 Q50299]
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** [http://www.uniprot.org/uniprot/P43412 P43412]
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** [http://www.uniprot.org/uniprot/P72641 P72641]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Adenylate kinase family protein}}
 +
{{#set: common name=adenylate kinase}}
 +
{{#set: common name=Adenylate kinase/UMP-CMP kinase}}
 +
{{#set: common name=UMP-CMP kinase}}
 +
{{#set: common name=Alpha-D-phosphohexomutase, C-terminal}}
 +
{{#set: ec number=EC-2.7.4.3}}
 +
{{#set: gene associated=Ec-15_000120|Ec-06_003080|Ec-01_006380|Ec-07_003680|Ec-00_009240|Ec-16_005090|Ec-14_004920|Ec-16_004100|Ec-12_005110}}
 +
{{#set: in pathway=PWY-7219}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 21:41, 17 March 2018

Reaction ADENYL-KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenylate kinase family protein
    • adenylate kinase
    • Adenylate kinase/UMP-CMP kinase
    • UMP-CMP kinase
    • Alpha-D-phosphohexomutase, C-terminal
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 AMP[c] + 1 ATP[c] => 2 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis: PWY-7219
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14215&oldid=14022"