Difference between revisions of "Ec-27 004630"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-281 RXN66-281] == * direction: ** LEFT-TO-RIGHT * common name: ** squalene synthase ** Isopen...")
 
(Created page with "Category:Gene == Gene Ec-13_002160 == * left end position: ** 3778053 * transcription direction: ** NEGATIVE * right end position: ** 3793194 * centisome position: ** 54.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-281 RXN66-281] ==
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== Gene Ec-13_002160 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3778053
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* common name:
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* transcription direction:
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** squalene synthase
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** NEGATIVE
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** Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs
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* right end position:
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** 3793194
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* centisome position:
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** 54.4681   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0427_0005
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** Esi0427_0005
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** TS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-14125]]
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** 1 [[CPD-465]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[SQUALENE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PPI]][c]
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** [[pantograph]]-[[aragem]]
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* With common name(s):
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* [[THRESYN-RXN]]
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** 1 presqualene diphosphate[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 squalene[c] '''+''' 1 NAD(P)+[c] '''+''' 1 diphosphate[c]
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** esiliculosus_genome
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***ec-number
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-11_001030]]
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* [[HOMOSER-THRESYN-PWY]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3778053}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02872 R02872]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=3793194}}
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{{#set: common name=squalene synthase}}
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{{#set: centisome position=54.4681    }}
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{{#set: common name=Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs}}
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{{#set: common name=Esi_0427_0005|Esi0427_0005|TS}}
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{{#set: gene associated=Ec-11_001030}}
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{{#set: reaction associated=RXN-14125|THRESYN-RXN}}
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{{#set: in pathway=}}
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{{#set: pathway associated=HOMOSER-THRESYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 21:44, 17 March 2018

Gene Ec-13_002160

  • left end position:
    • 3778053
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3793194
  • centisome position:
    • 54.4681
  • Synonym(s):
    • Esi_0427_0005
    • Esi0427_0005
    • TS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004630&oldid=14264"