Difference between revisions of "CPD-173"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-CYTIDINE-5-DIPHOSPHO-2-C 4-CYTIDINE-5-DIPHOSPHO-2-C] == * smiles: ** CC(O)(CO)C(O)COP(OP([O-]...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTI-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-CYTIDINE-5-DIPHOSPHO-2-C 4-CYTIDINE-5-DIPHOSPHO-2-C] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTI-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN] ==
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* smiles:
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* direction:
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** CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(O)C(O)C(N1(C=CC(N)=NC(=O)1))O2))([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L
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* common name:
 
* common name:
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** 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
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** ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
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* molecular weight:
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** EsV-1-128
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** 519.295   
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** EsV-1-180
 +
** Ribonucleoside-diphosphate reductase small chain
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
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** CDP-ME
 
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** CDP-methyl-D-erythritol
 
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** 4-diphosphocytidyl-2C-methyl-D-erythritol
 
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** 4-diphosphocytidyl-2-C-methylerythritol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.7.1.148-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[Ribonucleoside-Diphosphates]][c] '''=>''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Deoxy-Ribonucleoside-Diphosphates]][c]
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* [[2.7.7.60-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a reduced thioredoxin[c] '''+''' 1 a ribonucleoside diphosphate[c] '''=>''' 1 an oxidized thioredoxin[c] '''+''' 1 H2O[c] '''+''' 1 a 2'-deoxyribonucleoside 5'-diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Ec-06_005120]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
 +
* [[Ec-21_002920]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-11_002170]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-19_000440]]
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** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
* [[Ec-06_005570]]
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** ESILICULOSUS_GENOME
 +
***EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=24970669 24970669]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23252 23252]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57823 57823]
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** [http://www.genome.jp/dbget-bin/www_bget?R04294 R04294]
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* BIGG : 216317
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P89462 P89462]
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** [http://www.genome.jp/dbget-bin/www_bget?C11435 C11435]
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** [http://www.uniprot.org/uniprot/Q7M0K8 Q7M0K8]
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{{#set: smiles=CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(O)C(O)C(N1(C=CC(N)=NC(=O)1))O2))([O-])=O}}
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** [http://www.uniprot.org/uniprot/Q91YM8 Q91YM8]
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{{#set: inchi key=InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L}}
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** [http://www.uniprot.org/uniprot/P09938 P09938]
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{{#set: common name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol}}
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** [http://www.uniprot.org/uniprot/Q8IL94 Q8IL94]
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{{#set: molecular weight=519.295    }}
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** [http://www.uniprot.org/uniprot/P32984 P32984]
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{{#set: common name=CDP-ME|CDP-methyl-D-erythritol|4-diphosphocytidyl-2C-methyl-D-erythritol|4-diphosphocytidyl-2-C-methylerythritol}}
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** [http://www.uniprot.org/uniprot/P50647 P50647]
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{{#set: consumed by=2.7.1.148-RXN}}
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** [http://www.uniprot.org/uniprot/P50650 P50650]
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{{#set: produced by=2.7.7.60-RXN}}
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** [http://www.uniprot.org/uniprot/P50620 P50620]
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** [http://www.uniprot.org/uniprot/O83972 O83972]
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** [http://www.uniprot.org/uniprot/P43755 P43755]
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** [http://www.uniprot.org/uniprot/Q9PJ87 Q9PJ87]
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** [http://www.uniprot.org/uniprot/P39452 P39452]
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** [http://www.uniprot.org/uniprot/O66503 O66503]
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** [http://www.uniprot.org/uniprot/Q9JU45 Q9JU45]
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** [http://www.uniprot.org/uniprot/P47473 P47473]
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** [http://www.uniprot.org/uniprot/P37146 P37146]
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** [http://www.uniprot.org/uniprot/O26748 O26748]
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** [http://www.uniprot.org/uniprot/O28609 O28609]
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** [http://www.uniprot.org/uniprot/Q9PIR3 Q9PIR3]
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** [http://www.uniprot.org/uniprot/Q9JU43 Q9JU43]
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** [http://www.uniprot.org/uniprot/P55982 P55982]
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** [http://www.uniprot.org/uniprot/P03190 P03190]
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** [http://www.uniprot.org/uniprot/P00452 P00452]
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** [http://www.uniprot.org/uniprot/P69924 P69924]
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** [http://www.uniprot.org/uniprot/P07201 P07201]
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** [http://www.uniprot.org/uniprot/P26713 P26713]
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** [http://www.uniprot.org/uniprot/P11158 P11158]
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** [http://www.uniprot.org/uniprot/P11157 P11157]
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** [http://www.uniprot.org/uniprot/P23921 P23921]
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** [http://www.uniprot.org/uniprot/P31350 P31350]
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** [http://www.uniprot.org/uniprot/Q60561 Q60561]
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** [http://www.uniprot.org/uniprot/Q03604 Q03604]
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** [http://www.uniprot.org/uniprot/P37426 P37426]
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** [http://www.uniprot.org/uniprot/P17424 P17424]
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** [http://www.uniprot.org/uniprot/P36602 P36602]
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** [http://www.uniprot.org/uniprot/P36603 P36603]
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** [http://www.uniprot.org/uniprot/P50643 P50643]
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** [http://www.uniprot.org/uniprot/P50645 P50645]
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** [http://www.uniprot.org/uniprot/Q66662 Q66662]
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** [http://www.uniprot.org/uniprot/Q66663 Q66663]
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** [http://www.uniprot.org/uniprot/P49723 P49723]
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** [http://www.uniprot.org/uniprot/P50651 P50651]
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** [http://www.uniprot.org/uniprot/P78027 P78027]
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** [http://www.uniprot.org/uniprot/P74240 P74240]
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** [http://www.uniprot.org/uniprot/O36410 O36410]
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** [http://www.uniprot.org/uniprot/O36411 O36411]
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** [http://www.uniprot.org/uniprot/P49730 P49730]
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** [http://www.uniprot.org/uniprot/Q89941 Q89941]
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** [http://www.uniprot.org/uniprot/Q98526 Q98526]
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** [http://www.uniprot.org/uniprot/O41111 O41111]
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** [http://www.uniprot.org/uniprot/Q9YMK7 Q9YMK7]
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** [http://www.uniprot.org/uniprot/Q9YMI1 Q9YMI1]
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** [http://www.uniprot.org/uniprot/Q9YMI0 Q9YMI0]
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** [http://www.uniprot.org/uniprot/O57175 O57175]
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** [http://www.uniprot.org/uniprot/O39262 O39262]
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** [http://www.uniprot.org/uniprot/O39263 O39263]
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** [http://www.uniprot.org/uniprot/Q9YTK7 Q9YTK7]
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** [http://www.uniprot.org/uniprot/Q9YTK6 Q9YTK6]
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** [http://www.uniprot.org/uniprot/Q9UW15 Q9UW15]
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** [http://www.uniprot.org/uniprot/Q9SJ20 Q9SJ20]
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** [http://www.uniprot.org/uniprot/P03175 P03175]
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** [http://www.uniprot.org/uniprot/P09247 P09247]
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** [http://www.uniprot.org/uniprot/P09248 P09248]
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** [http://www.uniprot.org/uniprot/P28847 P28847]
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** [http://www.uniprot.org/uniprot/P28846 P28846]
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** [http://www.uniprot.org/uniprot/P69520 P69520]
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** [http://www.uniprot.org/uniprot/Q01319 Q01319]
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** [http://www.uniprot.org/uniprot/P10224 P10224]
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** [http://www.uniprot.org/uniprot/P16782 P16782]
 +
** [http://www.uniprot.org/uniprot/P20503 P20503]
 +
** [http://www.uniprot.org/uniprot/P26685 P26685]
 +
** [http://www.uniprot.org/uniprot/P12848 P12848]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor}}
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{{#set: common name=EsV-1-128}}
 +
{{#set: common name=EsV-1-180}}
 +
{{#set: common name=Ribonucleoside-diphosphate reductase small chain}}
 +
{{#set: ec number=EC-1.17.4.1}}
 +
{{#set: gene associated=Ec-06_005120|Ec-21_002920|Ec-11_002170|Ec-19_000440|Ec-06_005570}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 22:55, 17 March 2018

Reaction RIBONUCLEOSIDE-DIP-REDUCTI-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
    • EsV-1-128
    • EsV-1-180
    • Ribonucleoside-diphosphate reductase small chain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-173&oldid=15030"