Difference between revisions of "S-3-HYDROXYBUTANOYL-COA"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARTRANSFORM-RXN AICARTRANSFORM-RXN] == * direction: ** REVERSIBLE * common name: ** Bifunctional...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ornithine decar...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AICARTRANSFORM-RXN AICARTRANSFORM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Bifunctional purine synthesis protein (phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase)
+
** Ornithine decarboxylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.2.3 EC-2.1.2.3]
+
** [http://enzyme.expasy.org/EC/4.1.1.17 EC-4.1.1.17]
 
* Synonym(s):
 
* Synonym(s):
−
** 5-aminoimidazole-4-carboxamide ribonucleotide transformylase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[AICAR]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''<=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
+
** 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c] '''<=>''' 1 a tetrahydrofolate[c] '''+''' 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]
+
** 1 L-ornithine[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 putrescine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-11_005390]]
+
* [[Ec-11_003270]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
+
* [[ORNDEG-PWY]], superpathway of ornithine degradation: [http://metacyc.org/META/NEW-IMAGE?object=ORNDEG-PWY ORNDEG-PWY]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
+
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22192 22192]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04560 R04560]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P43852 P43852]
+
** [http://www.uniprot.org/uniprot/P24169 P24169]
−
** [http://www.uniprot.org/uniprot/P12048 P12048]
+
** [http://www.uniprot.org/uniprot/P27121 P27121]
−
** [http://www.uniprot.org/uniprot/P31335 P31335]
+
** [http://www.uniprot.org/uniprot/P27116 P27116]
−
** [http://www.uniprot.org/uniprot/P26978 P26978]
+
** [http://www.uniprot.org/uniprot/P27120 P27120]
−
** [http://www.uniprot.org/uniprot/P15639 P15639]
+
** [http://www.uniprot.org/uniprot/P43099 P43099]
−
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
+
** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
−
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
+
** [http://www.uniprot.org/uniprot/P08432 P08432]
−
** [http://www.uniprot.org/uniprot/P31939 P31939]
+
** [http://www.uniprot.org/uniprot/P27118 P27118]
−
** [http://www.uniprot.org/uniprot/Q59493 Q59493]
+
** [http://www.uniprot.org/uniprot/P11926 P11926]
−
** [http://www.uniprot.org/uniprot/P38009 P38009]
+
** [http://www.uniprot.org/uniprot/P14019 P14019]
−
** [http://www.uniprot.org/uniprot/P54113 P54113]
+
** [http://www.uniprot.org/uniprot/P00860 P00860]
−
** [http://www.uniprot.org/uniprot/O64767 O64767]
+
** [http://www.uniprot.org/uniprot/P09057 P09057]
−
** [http://www.uniprot.org/uniprot/O74928 O74928]
+
** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P44317 P44317]
−
{{#set: common name=Bifunctional purine synthesis protein (phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase)}}
+
** [http://www.uniprot.org/uniprot/O66940 O66940]
−
{{#set: ec number=EC-2.1.2.3}}
+
** [http://www.uniprot.org/uniprot/P27119 P27119]
−
{{#set: common name=5-aminoimidazole-4-carboxamide ribonucleotide transformylase}}
+
** [http://www.uniprot.org/uniprot/P49725 P49725]
−
{{#set: gene associated=Ec-11_005390}}
+
** [http://www.uniprot.org/uniprot/P50134 P50134]
−
{{#set: in pathway=PWY-6123|PWY-6124}}
+
** [http://www.uniprot.org/uniprot/P93351 P93351]
 +
** [http://www.uniprot.org/uniprot/P93357 P93357]
 +
** [http://www.uniprot.org/uniprot/O15696 O15696]
 +
** [http://www.uniprot.org/uniprot/Q84527 Q84527]
 +
** [http://www.uniprot.org/uniprot/P41931 P41931]
 +
** [http://www.uniprot.org/uniprot/O69865 O69865]
 +
** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Ornithine decarboxylase}}
 +
{{#set: ec number=EC-4.1.1.17}}
 +
{{#set: gene associated=Ec-11_003270}}
 +
{{#set: in pathway=ORNDEG-PWY|PWY-6305|PWY-46}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 21:56, 17 March 2018

Reaction ORNDECARBOX-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ornithine decarboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • ORNDEG-PWY, superpathway of ornithine degradation: ORNDEG-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6305, putrescine biosynthesis IV: PWY-6305
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-46, putrescine biosynthesis III: PWY-46
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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