Difference between revisions of "Ec-03 002330"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP GDP] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(N)=NC=...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9650 RXN-9650] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-prote...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP GDP] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9650 RXN-9650] ==
−
* smiles:
+
* direction:
−
** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=QGWNDRXFNXRZMB-UUOKFMHZSA-K
+
 
* common name:
 
* common name:
−
** GDP
+
** 3-oxoacyl-[acyl-carrier-protein] synthase
−
* molecular weight:
+
** Beta-ketoacyl synthase, N-terminal
−
** 440.179   
+
** beta-ketoacyl synthase, partial
 +
** Thiolase-like, subgroup
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
−
** ppG
 
−
** guanosine-5'-diphosphate
 
−
** guanosine-diphosphate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN0-748]]
+
* With identifiers:
−
* [[GDPPYPHOSKIN-RXN]]
+
** 1 [[PROTON]][c] '''+''' 1 [[Hexanoyl-ACPs]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-Oxo-octanoyl-ACPs]][c]
−
* [[GDPKIN-RXN]]
+
* With common name(s):
−
* [[GUANOSINE-DIPHOSPHATASE-RXN]]
+
** 1 H+[c] '''+''' 1 a hexanoyl-[acyl-carrier-protein][c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 CO2[c] '''+''' 1 coenzyme A[c] '''+''' 1 a 3-oxo-octanoyl-[acp][c]
−
* [[GDPREDUCT-RXN]]
+
 
−
== Reaction(s) known to produce the compound ==
+
== Genes associated with this reaction  ==
−
* [[RXN-5464]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[RXNQT-4141]]
+
* [[Ec-27_003480]]
−
* [[RXN-5462]]
+
** ESILICULOSUS_GENOME
−
* [[2.4.1.83-RXN]]
+
***EC-NUMBER
−
* [[RXN-5463]]
+
* [[Ec-12_000640]]
−
* [[GALACTOSIDE-3-FUCOSYLTRANSFERASE-RXN]]
+
** ESILICULOSUS_GENOME
−
* [[2.4.1.142-RXN]]
+
***EC-NUMBER
−
* [[RXN-16602]]
+
* [[Ec-27_002090]]
−
* [[RXN0-5462]]
+
** ESILICULOSUS_GENOME
−
* [[RXN-8988]]
+
***EC-NUMBER
−
* [[RXN-9463]]
+
* [[Ec-12_000650]]
−
* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
+
** ESILICULOSUS_GENOME
−
* [[GUANYL-KIN-RXN]]
+
***GO-TERM
−
* [[2.4.1.36-RXN]]
+
== Pathways  ==
−
== Reaction(s) of unknown directionality ==
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
* [[RXN-14117]]
+
** '''20''' reactions found over '''31''' reactions in the full pathway
−
* [[RXN-15268]]
+
== Reconstruction information  ==
−
* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
+
* Category: [[annotation]]
−
* [[RXN-12486]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[URKI-RXN]]
+
*** Tool: [[pathwaytools]]
−
* [[GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN]]
+
−
* [[2.4.1.221-RXN]]
+
 
== External links  ==
 
== External links  ==
−
* CAS : 146-91-8
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* BIGG : 33599
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
* PUBCHEM:
+
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21604868 21604868]
+
{{#set: common name=beta-ketoacyl synthase, partial}}
−
* HMDB : HMDB01201
+
{{#set: common name=Thiolase-like, subgroup}}
−
* LIGAND-CPD:
+
{{#set: ec number=EC-2.3.1.86}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00035 C00035]
+
{{#set: ec number=EC-2.3.1.85}}
−
* CHEMSPIDER:
+
{{#set: ec number=EC-2.3.1.41}}
−
** [http://www.chemspider.com/Chemical-Structure.10239187.html 10239187]
+
{{#set: gene associated=Ec-27_003480|Ec-12_000640|Ec-27_002090|Ec-12_000650}}
−
* CHEBI:
+
{{#set: in pathway=PWY-5994}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58189 58189]
+
{{#set: reconstruction category=annotation}}
−
* METABOLIGHTS : MTBLC58189
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: inchi key=InChIKey=QGWNDRXFNXRZMB-UUOKFMHZSA-K}}
+
−
{{#set: common name=GDP}}
+
−
{{#set: molecular weight=440.179    }}
+
−
{{#set: common name=ppG|guanosine-5'-diphosphate|guanosine-diphosphate}}
+
−
{{#set: consumed by=RXN0-748|GDPPYPHOSKIN-RXN|GDPKIN-RXN|GUANOSINE-DIPHOSPHATASE-RXN|GDPREDUCT-RXN}}
+
−
{{#set: produced by=RXN-5464|RXNQT-4141|RXN-5462|2.4.1.83-RXN|RXN-5463|GALACTOSIDE-3-FUCOSYLTRANSFERASE-RXN|2.4.1.142-RXN|RXN-16602|RXN0-5462|RXN-8988|RXN-9463|ADENYLOSUCCINATE-SYNTHASE-RXN|GUANYL-KIN-RXN|2.4.1.36-RXN}}
+
−
{{#set: consumed or produced by=RXN-14117|RXN-15268|SUCCINATE--COA-LIGASE-GDP-FORMING-RXN|RXN-12486|URKI-RXN|GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN|2.4.1.221-RXN}}
+

Revision as of 21:59, 17 March 2018

Reaction RXN-9650

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-[acyl-carrier-protein] synthase
    • Beta-ketoacyl synthase, N-terminal
    • beta-ketoacyl synthase, partial
    • Thiolase-like, subgroup
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 20 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_002330&oldid=15351"