Difference between revisions of "RXN-2425"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] == * direction: ** REVERSIBLE * common name: ** ClpP/crotonase-like domain ** Be...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14727 RXN-14727] == * direction: ** REVERSIBLE * common name: ** Amidase * ec number: ** [http:...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14727 RXN-14727] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
** ClpP/crotonase-like domain
+
** Amidase
** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
+
** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
+
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
+
** [http://enzyme.expasy.org/EC/3.5.1.4 EC-3.5.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[TRANS-23-DEHYDROADIPYL-COA]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[PROPIONAMIDE]][c] '''<=>''' 1 [[PROPIONATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
** 1 (3S)-hydroxyadipyl-CoA[c] '''<=>''' 1 H2O[c] '''+''' 1 trans-2,3-dehydroadipyl-coA[c]
+
** 1 H2O[c] '''+''' 1 propionamide[c] '''<=>''' 1 propanoate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Ec-17_000320]]
+
* [[Ec-06_009020]]
** [[pantograph]]-[[aragem]]
+
* [[Ec-16_003560]]
+
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
***EC-NUMBER
+
***AUTOMATED-NAME-MATCH
* [[Ec-14_006530]]
+
* [[Ec-02_005910]]
 
** ESILICULOSUS_GENOME
 
** ESILICULOSUS_GENOME
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
** [[pantograph]]-[[aragem]]
 
* [[Ec-16_001250]]
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
* [[Ec-06_001380]]
 
** ESILICULOSUS_GENOME
 
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321]
 
** '''2''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[annotation]]
** [[pantograph]]:
+
** Source: [[annotation-esiliculosus_genome]]
*** [[aragem]]
+
*** Tool: [[pathwaytools]]
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34863 34863]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942]
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=ClpP/crotonase-like domain}}
+
{{#set: common name=Amidase}}
{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
+
{{#set: ec number=EC-3.5.1.4}}
{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
+
{{#set: gene associated=Ec-06_009020|Ec-02_005910}}
{{#set: ec number=EC-4.2.1.17}}
+
{{#set: in pathway=}}
{{#set: gene associated=Ec-17_000320|Ec-16_003560|Ec-14_006530|Ec-16_001250|Ec-06_001380}}
+
{{#set: in pathway=PWY-1361|PWY0-321}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=aragem}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=esiliculosus_genome}}
 

Revision as of 23:00, 17 March 2018

Reaction RXN-14727

  • direction:
    • REVERSIBLE
  • common name:
    • Amidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links