Difference between revisions of "CADAVERINE"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CADAVERINE CADAVERINE] == * smiles: ** C([N+])CCCC[N+] * inchi key: ** InChIKey=VHRGRCVQAFMJIZ-...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R147-RXN R147-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1,2-dihydroxy-3-keto-5-methyl...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CADAVERINE CADAVERINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R147-RXN R147-RXN] ==
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* smiles:
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* direction:
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** C([N+])CCCC[N+]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VHRGRCVQAFMJIZ-UHFFFAOYSA-P
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* common name:
 
* common name:
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** cadaverine
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** 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
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* molecular weight:
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* ec number:
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** 104.195   
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** [http://enzyme.expasy.org/EC/1.13.11.54 EC-1.13.11.54]
 
* Synonym(s):
 
* Synonym(s):
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** diaminopentane
 
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** 1,5-Diaminopentane
 
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** 1,5-pentanediamine
 
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** pentamethylenediamine
 
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** BioDex 1-
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN0-5217]]
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* With identifiers:
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* [[RXN-11784]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-85]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-479]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 oxygen[c] '''+''' 1 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one[c] '''=>''' 1 formate[c] '''+''' 1 H+[c] '''+''' 1 2-oxo-4-methylthiobutanoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-20_000070]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-4361]], S-methyl-5-thio-α-D-ribose 1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4361 PWY-4361]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 462-94-2
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24504 24504]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=3718401 3718401]
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* LIGAND-RXN:
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* HMDB : HMDB02322
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** [http://www.genome.jp/dbget-bin/www_bget?R07364 R07364]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C01672 C01672]
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{{#set: common name=1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase}}
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* CHEMSPIDER:
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{{#set: ec number=EC-1.13.11.54}}
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** [http://www.chemspider.com/Chemical-Structure.2949420.html 2949420]
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{{#set: gene associated=Ec-20_000070}}
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* CHEBI:
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{{#set: in pathway=PWY-4361}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58384 58384]
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{{#set: reconstruction category=annotation}}
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* BIGG : 38125
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: smiles=C([N+])CCCC[N+]}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=VHRGRCVQAFMJIZ-UHFFFAOYSA-P}}
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{{#set: common name=cadaverine}}
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{{#set: molecular weight=104.195    }}
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{{#set: common name=diaminopentane|1,5-Diaminopentane|1,5-pentanediamine|pentamethylenediamine|BioDex 1-}}
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{{#set: consumed by=RXN0-5217|RXN-11784}}
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Revision as of 22:02, 17 March 2018

Reaction R147-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one[c] => 1 formate[c] + 1 H+[c] + 1 2-oxo-4-methylthiobutanoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4361, S-methyl-5-thio-α-D-ribose 1-phosphate degradation: PWY-4361
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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