Difference between revisions of "CPD1F-95"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-LIGASE-ATP-RXN DNA-LIGASE-ATP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** DNA ligas...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5132 PWY-5132] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DNA-LIGASE-ATP-RXN DNA-LIGASE-ATP-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3481 TAX-3481]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** humulone biosynthesis
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** DNA ligase (ATP)
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* ec number:
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** [http://enzyme.expasy.org/EC/6.5.1.7 EC-6.5.1.7]
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** [http://enzyme.expasy.org/EC/6.5.1.1 EC-6.5.1.1]
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** [http://enzyme.expasy.org/EC/6.5.1.6 EC-6.5.1.6]
 
* Synonym(s):
 
* Synonym(s):
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** Bitter α-acid (humulone) biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''4''' reactions in the full pathway
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* With identifiers:
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* [[RXN-7810]]
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** 1 [[DNA-N]][c] '''+''' 1 [[DEOXYNUCLEOTIDESM]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[DEOXYNUCLEOTIDESM]][c]
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* [[RXN-7811]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 DNAn[c] '''+''' 1 (deoxynucleotides)(m)[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 (deoxynucleotides)(m)[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.156-RXN 2.3.1.156-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7807 RXN-7807]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_011680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-07_005930]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3481}}
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* LIGAND-RXN:
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{{#set: common name=humulone biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00381 R00381]
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{{#set: common name=Bitter α-acid (humulone) biosynthesis}}
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* UNIPROT:
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P12000 P12000]
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{{#set: reaction not found=4}}
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** [http://www.uniprot.org/uniprot/P18858 P18858]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/P35970 P35970]
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** [http://www.uniprot.org/uniprot/Q9QNG8 Q9QNG8]
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** [http://www.uniprot.org/uniprot/Q9PM08 Q9PM08]
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** [http://www.uniprot.org/uniprot/Q57635 Q57635]
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** [http://www.uniprot.org/uniprot/P49917 P49917]
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** [http://www.uniprot.org/uniprot/P49916 P49916]
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** [http://www.uniprot.org/uniprot/P37913 P37913]
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** [http://www.uniprot.org/uniprot/P51892 P51892]
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** [http://www.uniprot.org/uniprot/P16272 P16272]
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** [http://www.uniprot.org/uniprot/P33798 P33798]
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** [http://www.uniprot.org/uniprot/P00970 P00970]
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** [http://www.uniprot.org/uniprot/P00969 P00969]
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** [http://www.uniprot.org/uniprot/P04819 P04819]
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** [http://www.uniprot.org/uniprot/P19088 P19088]
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** [http://www.uniprot.org/uniprot/P07717 P07717]
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** [http://www.uniprot.org/uniprot/P26813 P26813]
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** [http://www.uniprot.org/uniprot/Q02093 Q02093]
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** [http://www.uniprot.org/uniprot/Q23694 Q23694]
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** [http://www.uniprot.org/uniprot/Q67480 Q67480]
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** [http://www.uniprot.org/uniprot/Q42572 Q42572]
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** [http://www.uniprot.org/uniprot/P20492 P20492]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=DNA ligase (ATP)}}
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{{#set: ec number=EC-6.5.1.7}}
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{{#set: ec number=EC-6.5.1.1}}
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{{#set: ec number=EC-6.5.1.6}}
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{{#set: gene associated=Ec-01_011680|Ec-07_005930}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 20:24, 17 March 2018

Reaction DNA-LIGASE-ATP-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 DNAn[c] + 1 (deoxynucleotides)(m)[c] + 1 ATP[c] => 1 diphosphate[c] + 1 AMP[c] + 1 (deoxynucleotides)(m)[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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