Difference between revisions of "Ec-12 003110"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6692 PWY-6692] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11520 RXN-11520] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
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* common name:
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** Fe(II) oxidation
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* Synonym(s):
 
* Synonym(s):
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** iron oxidation
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''6''' reactions in the full pathway
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* With identifiers:
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* [[NADH-DEHYDROG-A-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[1-7-DIMETHYLXANTHINE]][c] '''=>''' 1 [[CPD-12483]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
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* [[RXN-15829]]
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* With common name(s):
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* [[RXN-15830]]
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** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 paraxanthine[c] '''=>''' 1 1,7-dimethylurate[c] '''+''' 1 hydrogen peroxide[c]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12075 RXN-12075]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12076 RXN-12076]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15832 RXN-15832]
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* [[Ec-20_000230]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-20_000210]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-6632]], caffeine degradation IV (bacteria, via demethylation and oxidation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6632 PWY-6632]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: common name=Fe(II) oxidation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07977 R07977]
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{{#set: common name=iron oxidation}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=3}}
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{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
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{{#set: reaction not found=6}}
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{{#set: in pathway=PWY-6632}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 21:04, 17 March 2018

Reaction RXN-11520

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6632, caffeine degradation IV (bacteria, via demethylation and oxidation): PWY-6632
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_003110&oldid=11540"