Difference between revisions of "Ec-25 002130"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCMP-DEAMINASE-RXN DCMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enz...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P184-PWY P184-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCMP-DEAMINASE-RXN DCMP-DEAMINASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** protocatechuate degradation I (meta-cleavage pathway)
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** [http://enzyme.expasy.org/EC/3.5.4.12 EC-3.5.4.12]
 
* Synonym(s):
 
* Synonym(s):
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** protocatechuate degradation via meta-cleavage
 
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** protocatechuate 4,5-cleavage
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[OXALODECARB-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[DCMP]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DUMP]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=1.2.1.45-RXN 1.2.1.45-RXN]
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** 1 H+[c] '''+''' 1 H2O[c] '''+''' 1 dCMP[c] '''=>''' 1 ammonium[c] '''+''' 1 dUMP[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=PROTOCATECHUATE-45-DIOXYGENASE-RXN PROTOCATECHUATE-45-DIOXYGENASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R107-RXN R107-RXN]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2462 RXN-2462]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2463 RXN-2463]
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* [[Ec-12_003010]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2464 RXN-2464]
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** [[pantograph]]-[[aragem]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9983 RXN-9983]
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== Pathways  ==
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* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1224}}
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* RHEA:
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{{#set: common name=protocatechuate degradation I (meta-cleavage pathway)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22924 22924]
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{{#set: common name=protocatechuate degradation via meta-cleavage|protocatechuate 4,5-cleavage}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01663 R01663]
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{{#set: reaction not found=8}}
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* UNIPROT:
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{{#set: completion rate=13.0}}
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** [http://www.uniprot.org/uniprot/P32321 P32321]
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** [http://www.uniprot.org/uniprot/P00814 P00814]
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** [http://www.uniprot.org/uniprot/P16006 P16006]
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** [http://www.uniprot.org/uniprot/P06773 P06773]
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** [http://www.uniprot.org/uniprot/O74069 O74069]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.5.4.12}}
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{{#set: gene associated=Ec-12_003010}}
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{{#set: in pathway=PWY-7210}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 21:20, 17 March 2018

Reaction DCMP-DEAMINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 H2O[c] + 1 dCMP[c] => 1 ammonium[c] + 1 dUMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-25_002130&oldid=12591"