Difference between revisions of "RXN-9527"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** CDP-diacylgl...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2561 RXN-2561] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/5....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHAGLYPSYN-RXN PHOSPHAGLYPSYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2561 RXN-2561] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
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** LEFT-TO-RIGHT
−
* common name:
+
−
** CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.8.5 EC-2.7.8.5]
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** [http://enzyme.expasy.org/EC/5.5.1.24 EC-5.5.1.24]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLYCEROL-3P]][c] '''+''' 1 [[CDPDIACYLGLYCEROL]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c]
+
** 1 [[MPBQ]][c] '''=>''' 1 [[DELTA-TOCOPHEROL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 sn-glycerol 3-phosphate[c] '''+''' 1 a CDP-diacylglycerol[c] '''<=>''' 1 CMP[c] '''+''' 1 H+[c] '''+''' 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c]
+
** 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''=>''' 1 &delta;-tocopherol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-11_001460]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[aragem]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8]
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12593 12593]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01801 R01801]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07503 R07503]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q9JTH1 Q9JTH1]
+
{{#set: ec number=EC-5.5.1.24}}
−
** [http://www.uniprot.org/uniprot/P46322 P46322]
+
{{#set: in pathway=PWY-1422}}
−
** [http://www.uniprot.org/uniprot/P44528 P44528]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P47360 P47360]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
** [http://www.uniprot.org/uniprot/Q9PNM7 Q9PNM7]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/O25660 O25660]
+
−
** [http://www.uniprot.org/uniprot/O51663 O51663]
+
−
** [http://www.uniprot.org/uniprot/O67908 O67908]
+
−
** [http://www.uniprot.org/uniprot/Q49839 Q49839]
+
−
** [http://www.uniprot.org/uniprot/P75520 P75520]
+
−
** [http://www.uniprot.org/uniprot/P74372 P74372]
+
−
** [http://www.uniprot.org/uniprot/Q48959 Q48959]
+
−
** [http://www.uniprot.org/uniprot/P0ABF8 P0ABF8]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase}}
+
−
{{#set: ec number=EC-2.7.8.5}}
+
−
{{#set: gene associated=Ec-11_001460}}
+
−
{{#set: in pathway=PWY4FS-8|PWY0-1545|PWY-5269|PWY4FS-7|PWY-5668}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:11, 21 March 2018

Reaction RXN-2561

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-methyl-6-phytyl-1,4-benzoquinol[c] => 1 δ-tocopherol[c]

Genes associated with this reaction

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-9527&oldid=16243"