Difference between revisions of "PHOSPHAGLYPSYN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FLAVONADPREDUCT-RXN FLAVONADPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ferredo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XXLG oligosaccha...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FLAVONADPREDUCT-RXN FLAVONADPREDUCT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12398 RXN-12398] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ferredoxin-NADP+ reductase
+
** xyloglucan XXLG oligosaccharide β-galactosidase
 +
** Glycoside hydrolase-type carbohydrate-binding, subgroup
 +
** Beta-galactosidase, family GH2
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.18.1.2 EC-1.18.1.2]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Oxidized-flavodoxins]][c] '''=>''' 1 [[Reduced-flavodoxins]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[CPD-13376]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 an oxidized flavodoxin[c] '''=>''' 1 a reduced flavodoxin[c] '''+''' 1 NADP+[c]
+
** 1 XXLG xyloglucan oligosaccharide[c] '''+''' 1 H2O[c] '''=>''' 1 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-03_002800]]
+
* Gene: [[Ec-06_001410]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-12_007000]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P22570 P22570]
 
−
** [http://www.uniprot.org/uniprot/P24134 P24134]
 
−
** [http://www.uniprot.org/uniprot/P41343 P41343]
 
−
** [http://www.uniprot.org/uniprot/Q00598 Q00598]
 
−
** [http://www.uniprot.org/uniprot/Q44532 Q44532]
 
−
** [http://www.uniprot.org/uniprot/Q9JRE3 Q9JRE3]
 
−
** [http://www.uniprot.org/uniprot/P08165 P08165]
 
−
** [http://www.uniprot.org/uniprot/Q7M1T0 Q7M1T0]
 
−
** [http://www.uniprot.org/uniprot/Q7M1S9 Q7M1S9]
 
−
** [http://www.uniprot.org/uniprot/P00454 P00454]
 
−
** [http://www.uniprot.org/uniprot/P00455 P00455]
 
−
** [http://www.uniprot.org/uniprot/P10933 P10933]
 
−
** [http://www.uniprot.org/uniprot/Q7M1R4 Q7M1R4]
 
−
** [http://www.uniprot.org/uniprot/P28861 P28861]
 
−
** [http://www.uniprot.org/uniprot/Q41736 Q41736]
 
−
** [http://www.uniprot.org/uniprot/Q61578 Q61578]
 
−
** [http://www.uniprot.org/uniprot/P48360 P48360]
 
−
** [http://www.uniprot.org/uniprot/Q41641 Q41641]
 
−
** [http://www.uniprot.org/uniprot/Q55318 Q55318]
 
−
** [http://www.uniprot.org/uniprot/O04397 O04397]
 
−
** [http://www.uniprot.org/uniprot/O23877 O23877]
 
−
** [http://www.uniprot.org/uniprot/P41345 P41345]
 
−
** [http://www.uniprot.org/uniprot/O04977 O04977]
 
−
** [http://www.uniprot.org/uniprot/P41344 P41344]
 
−
** [http://www.uniprot.org/uniprot/O65206 O65206]
 
−
** [http://www.uniprot.org/uniprot/O65208 O65208]
 
−
** [http://www.uniprot.org/uniprot/P53991 P53991]
 
−
** [http://www.uniprot.org/uniprot/O59710 O59710]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ferredoxin-NADP+ reductase}}
+
{{#set: common name=xyloglucan XXLG oligosaccharide β-galactosidase}}
−
{{#set: ec number=EC-1.18.1.2}}
+
{{#set: common name=Glycoside hydrolase-type carbohydrate-binding, subgroup}}
−
{{#set: gene associated=Ec-03_002800}}
+
{{#set: common name=Beta-galactosidase, family GH2}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-3.2.1.23}}
 +
{{#set: gene associated=Ec-06_001410|Ec-12_007000}}
 +
{{#set: in pathway=PWY-6807}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:11, 21 March 2018

Reaction RXN-12398

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xyloglucan XXLG oligosaccharide β-galactosidase
    • Glycoside hydrolase-type carbohydrate-binding, subgroup
    • Beta-galactosidase, family GH2
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 XXLG xyloglucan oligosaccharide[c] + 1 H2O[c] => 1 D-galactopyranose[c] + 1 XXXG xyloglucan oligosaccharide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PHOSPHAGLYPSYN-RXN&oldid=16254"