Difference between revisions of "Ec-01 011640"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRROLINECARBREDUCT-RXN PYRROLINECARBREDUCT-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** gallate biosynthesis
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** pyrroline-5-carboxylate reductase
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** Pyrroline-5-carboxylate reductase
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** NAD(P)-binding domain
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* ec number:
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** [http://enzyme.expasy.org/EC/1.5.1.2 EC-1.5.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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** 2 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-07_000550]]
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** 2 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 (S)-1-pyrroline-5-carboxylate[c] '''=>''' 1 L-proline[c] '''+''' 1 NAD(P)+[c]
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*** [[Ec-26_004120]]
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*** [[Ec-02_006010]]
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== Genes associated with this reaction  ==
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*** [[Ec-14_005400]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* Gene: [[Ec-07_007350]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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*** Assignment: GO-TERM
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== Reaction(s) not found ==
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* Gene: [[Ec-07_007360]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12131 RXN-12131]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12132 RXN-12132]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-07_007340]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-05_006410]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-03_004680]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01248 R01248]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01251 R01251]
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{{#set: common name=gallate biosynthesis}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P32322 P32322]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P27771 P27771]
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{{#set: completion rate=33.0}}
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** [http://www.uniprot.org/uniprot/Q9CEF7 Q9CEF7]
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** [http://www.uniprot.org/uniprot/P14383 P14383]
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** [http://www.uniprot.org/uniprot/Q9PNL8 Q9PNL8]
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** [http://www.uniprot.org/uniprot/Q9JWW2 Q9JWW2]
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** [http://www.uniprot.org/uniprot/Q12740 Q12740]
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** [http://www.uniprot.org/uniprot/P22008 P22008]
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** [http://www.uniprot.org/uniprot/P54904 P54904]
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** [http://www.uniprot.org/uniprot/P0A9L8 P0A9L8]
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** [http://www.uniprot.org/uniprot/P17817 P17817]
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** [http://www.uniprot.org/uniprot/P32263 P32263]
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** [http://www.uniprot.org/uniprot/Q12641 Q12641]
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** [http://www.uniprot.org/uniprot/P46725 P46725]
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** [http://www.uniprot.org/uniprot/P74572 P74572]
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** [http://www.uniprot.org/uniprot/Q04708 Q04708]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyrroline-5-carboxylate reductase}}
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{{#set: common name=Pyrroline-5-carboxylate reductase}}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: ec number=EC-1.5.1.2}}
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{{#set: gene associated=Ec-07_007350|Ec-07_007360|Ec-07_007340|Ec-05_006410|Ec-03_004680}}
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{{#set: in pathway=PROSYN-PWY|ARG-PRO-PWY|PWY-6344|PWY-4981|PWY-3341}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:11, 21 March 2018

Reaction PYRROLINECARBREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyrroline-5-carboxylate reductase
    • Pyrroline-5-carboxylate reductase
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PROSYN-PWY, L-proline biosynthesis I: PROSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III: PWY-3341
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_011640&oldid=16403"