Difference between revisions of "Ec-11 005860"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1435 RXN1G-1435] == * direction: ** LEFT-TO-RIGHT * common name: ** Trehalose 6-phosphate syn...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9555 RXN-9555] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1435 RXN1G-1435] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9555 RXN-9555] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
 
−
** HAD-like domain
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
+
** [http://enzyme.expasy.org/EC/3.1.2.14 EC-3.1.2.14]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD1G-768]][c] '''=>''' 1 [[CPD1G-1344]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[Cis-vaccenoyl-ACPs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CPD-9247]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 6-O-mycolyl-trehalose 6-phosphate[c] '''=>''' 1 trehalose-mono-mycolate[c] '''+''' 1 phosphate[c]
+
** 1 a cis-vaccenoyl-[acp][c] '''+''' 1 H2O[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 cis-vaccenate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Ec-06_003140]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-24_004390]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-11_002540]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-05_002680]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-20_003980]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
−
* [[Ec-19_005250]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-22_003320]]
 
−
** ESILICULOSUS_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Ec-08_005270]]
 
−
** ESILICULOSUS_GENOME
 
−
***EC-NUMBER
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[PWY-5973]], cis-vaccenate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5973 PWY-5973]
−
** '''30''' reactions found over '''182''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[annotation]]
+
* Category: [[gap-filling]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pathwaytools]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
+
{{#set: ec number=EC-3.1.2.14}}
−
{{#set: common name=HAD-like domain}}
+
{{#set: in pathway=PWY-5973}}
−
{{#set: ec number=EC-3.1.3.12}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: gene associated=Ec-06_003140|Ec-24_004390|Ec-11_002540|Ec-05_002680|Ec-20_003980|Ec-19_005250|Ec-22_003320|Ec-08_005270}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: in pathway=PWYG-321}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:11, 21 March 2018

Reaction RXN-9555

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a cis-vaccenoyl-[acp][c] + 1 H2O[c] => 1 a holo-[acyl-carrier protein][c] + 1 cis-vaccenate[c] + 1 H+[c]

Genes associated with this reaction

Pathways

  • PWY-5973, cis-vaccenate biosynthesis: PWY-5973
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005860&oldid=16415"