Difference between revisions of "Ec-26 002800"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.13.3-RXN 2.7.13.3-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phytochrome-like prot...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.13.3-RXN 2.7.13.3-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** biotin biosynthesis from 8-amino-7-oxononanoate I
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** Phytochrome-like protein 3
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** Histidine kinase-like protein
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** Histidine kinase-like ATPase, C-terminal domain
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** Signal transduction histidine kinase-related protein, C-terminal
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** Phytochrome-like protein 2
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** Signal transduction response regulator, receiver domain
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** CheY-like superfamily
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** Phytochrome, central region
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.13.3 EC-2.7.13.3]
 
* Synonym(s):
 
* Synonym(s):
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** biotin biosynthesis from 7-keto-8-aminopelargonate
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[2.8.1.6-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[Protein-Histidines]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Protein-phospho-L-histidines]][c] '''+''' 1 [[ADP]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-24_000980]]
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** 1 ATP[c] '''+''' 1 a [protein]-L-histidine[c] '''=>''' 1 H+[c] '''+''' 1 a [protein]-N-phospho-L-histidine[c] '''+''' 1 ADP[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[DAPASYN-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[Ec-06_005060]]
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*** [[Ec-01_005750]]
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** Source: [[annotation-esiliculosus_genome]]
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** 2 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-26_003580]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[DETHIOBIOTIN-SYN-RXN]]
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*** Assignment: EC-NUMBER
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** 1 associated gene(s):
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* Gene: [[Ec-22_000050]]
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*** [[Ec-01_005750]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-24_003660]]
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== Reaction(s) not found ==
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-28_000680]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Ec-06_006760]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-06_005140]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-27_001140]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-00_010160]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Ec-00_006180]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
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* Gene: [[Ec-06_005110]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways  ==
 +
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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{{#set: common name=Phytochrome-like protein 3}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: common name=Histidine kinase-like protein}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=Histidine kinase-like ATPase, C-terminal domain}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=Signal transduction histidine kinase-related protein, C-terminal}}
−
{{#set: common name=biotin biosynthesis from 8-amino-7-oxononanoate I}}
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{{#set: common name=Phytochrome-like protein 2}}
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{{#set: common name=biotin biosynthesis from 7-keto-8-aminopelargonate}}
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{{#set: common name=Signal transduction response regulator, receiver domain}}
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{{#set: reaction found=3}}
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{{#set: common name=CheY-like superfamily}}
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{{#set: total reaction=3}}
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{{#set: common name=Phytochrome, central region}}
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{{#set: completion rate=100.0}}
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{{#set: ec number=EC-2.7.13.3}}
 +
{{#set: gene associated=Ec-06_005060|Ec-26_003580|Ec-22_000050|Ec-24_003660|Ec-28_000680|Ec-06_006760|Ec-06_005140|Ec-27_001140|Ec-00_010160|Ec-00_006180|Ec-06_005110}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:12, 21 March 2018

Reaction 2.7.13.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phytochrome-like protein 3
    • Histidine kinase-like protein
    • Histidine kinase-like ATPase, C-terminal domain
    • Signal transduction histidine kinase-related protein, C-terminal
    • Phytochrome-like protein 2
    • Signal transduction response regulator, receiver domain
    • CheY-like superfamily
    • Phytochrome, central region
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-26_002800&oldid=16575"