Difference between revisions of "PWY-7143"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANYLYLTRANSFERASE-RXN MRNA-GUANYLYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
 
(Created page with "Category:Gene == Gene Ec-20_000230 == * left end position: ** 250721 * transcription direction: ** NEGATIVE * right end position: ** 276766 * centisome position: ** 4.8623...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MRNA-GUANYLYLTRANSFERASE-RXN MRNA-GUANYLYLTRANSFERASE-RXN] ==
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== Gene Ec-20_000230 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 250721
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* common name:
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* transcription direction:
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** mRNA guanylyltransferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.7.50 EC-2.7.7.50]
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** 276766
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* centisome position:
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** 4.8623066   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0058_0101
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** Esi0058_0101
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** XDH1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[RXN-11519]]
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** 2 [[PROTON]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[CPD-8630]][c] '''=>''' 1 [[G5-pppR-mRNAs]][c] '''+''' 1 [[PPI]][c]
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** [[pantograph]]-[[aragem]]
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* With common name(s):
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* [[RXN-11520]]
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** 2 H+[c] '''+''' 1 GTP[c] '''+''' 1 a 5'-diphospho-purine-[mRNA][c] '''=>''' 1 a 5'-(5'-triphosphoguanosine)-purine-[mRNA][c] '''+''' 1 diphosphate[c]
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** [[pantograph]]-[[aragem]]
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* [[RXN-11521]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-7682]]
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* [[Ec-04_002760]]
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** esiliculosus_genome
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** ESILICULOSUS_GENOME
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***automated-name-match
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[RXN0-901]]
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* [[PWY-7375]], mRNA capping I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7375 PWY-7375]
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** esiliculosus_genome
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** '''1''' reactions found over '''3''' reactions in the full pathway
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***automated-name-match
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== Reconstruction information  ==
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** [[pantograph]]-[[aragem]]
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* [[annotation]]:
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* [[XANTHINE-OXIDASE-RXN]]
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** [[pathwaytools]]:
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** [[pantograph]]-[[aragem]]
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*** [[esiliculosus_genome]]
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== Pathways associated ==
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* [[PWY-6607]]
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* [[SALVADEHYPOX-PWY]]
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* [[P164-PWY]]
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* [[PWY-6596]]
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* [[PWY-5497]]
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* [[PWY-6606]]
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* [[PWY-6999]]
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* [[PWY-6608]]
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* [[PWY-6632]]
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* [[PWY-5695]]
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* [[PWY-6538]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=250721}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03828 R03828]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=276766}}
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** [http://www.uniprot.org/uniprot/P32094 P32094]
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{{#set: centisome position=4.8623066    }}
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** [http://www.uniprot.org/uniprot/P33057 P33057]
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{{#set: common name=Esi_0058_0101|Esi0058_0101|XDH1}}
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** [http://www.uniprot.org/uniprot/O60942 O60942]
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{{#set: reaction associated=RXN-11519|RXN-11520|RXN-11521|RXN-7682|RXN0-901|XANTHINE-OXIDASE-RXN}}
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** [http://www.uniprot.org/uniprot/P04298 P04298]
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{{#set: pathway associated=PWY-6607|SALVADEHYPOX-PWY|P164-PWY|PWY-6596|PWY-5497|PWY-6606|PWY-6999|PWY-6608|PWY-6632|PWY-5695|PWY-6538}}
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** [http://www.uniprot.org/uniprot/P04318 P04318]
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** [http://www.uniprot.org/uniprot/P25950 P25950]
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** [http://www.uniprot.org/uniprot/P20979 P20979]
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** [http://www.uniprot.org/uniprot/P11079 P11079]
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** [http://www.uniprot.org/uniprot/Q01159 Q01159]
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** [http://www.uniprot.org/uniprot/Q84424 Q84424]
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** [http://www.uniprot.org/uniprot/Q98257 Q98257]
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** [http://www.uniprot.org/uniprot/Q98268 Q98268]
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** [http://www.uniprot.org/uniprot/P40997 P40997]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mRNA guanylyltransferase}}
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{{#set: ec number=EC-2.7.7.50}}
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{{#set: gene associated=Ec-04_002760}}
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{{#set: in pathway=PWY-7375}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Revision as of 20:23, 17 March 2018

Gene Ec-20_000230

  • left end position:
    • 250721
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 276766
  • centisome position:
    • 4.8623066
  • Synonym(s):
    • Esi_0058_0101
    • Esi0058_0101
    • XDH1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7143&oldid=8692"