Difference between revisions of "RXN-12400"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-12...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRNUTRANSHYDROGEN-RXN PYRNUTRANSHYDROGEN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** N...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5022 PWY-5022] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRNUTRANSHYDROGEN-RXN PYRNUTRANSHYDROGEN-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 4-aminobutanoate degradation V
+
** NAD(P)+ transhydrogenase (AB-specific)
 +
** NAD(P) transhydrogenase, alpha subunit
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.6.1.2 EC-1.6.1.2]
 +
** [http://enzyme.expasy.org/EC/1.6.1.3 EC-1.6.1.3]
 +
** [http://enzyme.expasy.org/EC/1.6.1.1 EC-1.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
−
** GABA degradation
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
−
* [[GLUTAMATE-DEHYDROGENASE-RXN]]
+
** 1 [[NADPH]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[NADP]][c]
−
** 3 associated gene(s):
+
* With common name(s):
−
*** [[Ec-06_008240]]
+
** 1 NADPH[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 NADP+[c]
−
*** [[Ec-12_008040]]
+
 
−
*** [[Ec-06_001980]]
+
== Genes associated with this reaction  ==
−
** 2 reconstruction source(s) associated:
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[annotation-esiliculosus_genome]]
+
* Gene: [[Ec-01_007000]]
−
*** [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
== Reaction(s) not found ==
+
*** Assignment: EC-NUMBER
−
* [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN 4-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]
+
* Gene: [[Ec-21_003320]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=BUTYRYL-COA-DEHYDROGENASE-RXN BUTYRYL-COA-DEHYDROGENASE-RXN]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=GABATRANSAM-RXN GABATRANSAM-RXN]
+
*** Assignment: GO-TERM
−
* [http://metacyc.org/META/NEW-IMAGE?object=R11-RXN R11-RXN]
+
== Pathways  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8889 RXN-8889]
+
* [[PWY-5083]], NAD/NADH phosphorylation and dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8890 RXN-8890]
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-1239}}
+
* RHEA:
−
{{#set: common name=4-aminobutanoate degradation V}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11692 11692]
−
{{#set: common name=GABA degradation}}
+
* LIGAND-RXN:
−
{{#set: reaction found=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00112 R00112]
−
{{#set: total reaction=7}}
+
* UNIPROT:
−
{{#set: completion rate=14.0}}
+
** [http://www.uniprot.org/uniprot/Q9JUR5 Q9JUR5]
 +
** [http://www.uniprot.org/uniprot/Q9JUR3 Q9JUR3]
 +
** [http://www.uniprot.org/uniprot/P11024 P11024]
 +
** [http://www.uniprot.org/uniprot/P07001 P07001]
 +
** [http://www.uniprot.org/uniprot/P0AB67 P0AB67]
 +
** [http://www.uniprot.org/uniprot/P43842 P43842]
 +
** [http://www.uniprot.org/uniprot/P43010 P43010]
 +
** [http://www.uniprot.org/uniprot/Q61941 Q61941]
 +
** [http://www.uniprot.org/uniprot/P73500 P73500]
 +
** [http://www.uniprot.org/uniprot/P73496 P73496]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=NAD(P)+ transhydrogenase (AB-specific)}}
 +
{{#set: common name=NAD(P) transhydrogenase, alpha subunit}}
 +
{{#set: ec number=EC-1.6.1.2}}
 +
{{#set: ec number=EC-1.6.1.3}}
 +
{{#set: ec number=EC-1.6.1.1}}
 +
{{#set: gene associated=Ec-01_007000|Ec-21_003320}}
 +
{{#set: in pathway=PWY-5083}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:12, 21 March 2018

Reaction PYRNUTRANSHYDROGEN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)+ transhydrogenase (AB-specific)
    • NAD(P) transhydrogenase, alpha subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADPH[c] + 1 NAD+[c] => 1 NADH[c] + 1 NADP+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5083, NAD/NADH phosphorylation and dephosphorylation: PWY-5083
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12400&oldid=16645"