Difference between revisions of "PWY-5808"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16625 RXN-16625] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ALPHA-AMINO-EPSILON-KETO-PIMELATE L-ALPHA-AMINO-EPSILON-KETO-PIMELATE] == * smiles: ** C([O-]...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16625 RXN-16625] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-ALPHA-AMINO-EPSILON-KETO-PIMELATE L-ALPHA-AMINO-EPSILON-KETO-PIMELATE] ==
* direction:
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* smiles:
** LEFT-TO-RIGHT
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** C([O-])(=O)C(CCCC(C([O-])=O)=O)[N+]
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* inchi key:
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** InChIKey=UKCSFKLWNHUBDY-BYPYZUCNSA-M
 
* common name:
 
* common name:
** Beta-ketoacyl synthase, N-terminal
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** L-α-amino-ε-keto-pimelate
** beta-ketoacyl synthase, partial
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* molecular weight:
** Thiolase-like, subgroup
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** 188.16   
** 3-oxoacyl-[acyl-carrier-protein] synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** L-2-Amino-6-oxopimelate
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** L-2-Amino-6-oxoheptanedioate
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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== Reaction(s) known to produce the compound ==
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[7Z-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[ACP]][c]
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== Reaction(s) of unknown directionality ==
* With common name(s):
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* [[RXN-4821]]
** 1 a malonyl-[acp][c] '''+''' 1 a (7Z)-hexadec-7-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a (9Z)-3-oxo-octadec-9-enoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_000650]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-27_003480]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-27_002090]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-12_000640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25202391 25202391]
{{#set: common name=beta-ketoacyl synthase, partial}}
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* CHEBI:
{{#set: common name=Thiolase-like, subgroup}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58556 58556]
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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* LIGAND-CPD:
{{#set: ec number=EC-2.3.1.41}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03871 C03871]
{{#set: gene associated=Ec-12_000650|Ec-27_003480|Ec-27_002090|Ec-12_000640}}
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{{#set: smiles=C([O-])(=O)C(CCCC(C([O-])=O)=O)[N+]}}
{{#set: in pathway=PWY-7664}}
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{{#set: inchi key=InChIKey=UKCSFKLWNHUBDY-BYPYZUCNSA-M}}
{{#set: reconstruction category=annotation}}
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{{#set: common name=L-α-amino-ε-keto-pimelate}}
{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: molecular weight=188.16    }}
{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=L-2-Amino-6-oxopimelate|L-2-Amino-6-oxoheptanedioate}}
 +
{{#set: reversible reaction associated=RXN-4821}}

Revision as of 13:13, 21 March 2018

Metabolite L-ALPHA-AMINO-EPSILON-KETO-PIMELATE

  • smiles:
    • C([O-])(=O)C(CCCC(C([O-])=O)=O)[N+]
  • inchi key:
    • InChIKey=UKCSFKLWNHUBDY-BYPYZUCNSA-M
  • common name:
    • L-α-amino-ε-keto-pimelate
  • molecular weight:
    • 188.16
  • Synonym(s):
    • L-2-Amino-6-oxopimelate
    • L-2-Amino-6-oxoheptanedioate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"C([O-])(=O)C(CCCC(C([O-])=O)=O)[N+" cannot be used as a page name in this wiki.