Difference between revisions of "Ec-27 003950"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE--TRNA-LIGASE-RXN GLYCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Gene == Gene Ec-13_002310 == * left end position: ** 3941759 * transcription direction: ** POSITIVE * right end position: ** 3947285 * centisome position: ** 56.8...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE--TRNA-LIGASE-RXN GLYCINE--TRNA-LIGASE-RXN] ==
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== Gene Ec-13_002310 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3941759
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* common name:
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* transcription direction:
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** Glycyl-tRNA synthetase
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** POSITIVE
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** Anticodon-binding
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* right end position:
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* ec number:
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** 3947285
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** [http://enzyme.expasy.org/EC/6.1.1.14 EC-6.1.1.14]
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* centisome position:
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** 56.828247   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0363_0009
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** Esi0363_0009
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[4.2.2.10-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''+''' 1 [[GLY-tRNAs]][c] '''=>''' 1 [[Charged-GLY-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 glycine[c] '''+''' 1 a tRNAgly[c] '''=>''' 1 a glycyl-[tRNAgly][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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* Reaction: [[RXN-14897]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_006790]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-07_006780]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-14_006280]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7243]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3941759}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16013 16013]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3947285}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03654 R03654]
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{{#set: centisome position=56.828247    }}
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* UNIPROT:
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{{#set: common name=Esi_0363_0009|Esi0363_0009}}
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** [http://www.uniprot.org/uniprot/P41250 P41250]
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{{#set: reaction associated=4.2.2.10-RXN|RXN-14897}}
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** [http://www.uniprot.org/uniprot/P54380 P54380]
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{{#set: pathway associated=PWY-7243}}
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** [http://www.uniprot.org/uniprot/Q9ZCB1 Q9ZCB1]
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** [http://www.uniprot.org/uniprot/P43822 P43822]
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** [http://www.uniprot.org/uniprot/P54381 P54381]
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** [http://www.uniprot.org/uniprot/O51344 O51344]
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** [http://www.uniprot.org/uniprot/Q46371 Q46371]
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** [http://www.uniprot.org/uniprot/Q9ZCB0 Q9ZCB0]
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** [http://www.uniprot.org/uniprot/Q9WY59 Q9WY59]
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** [http://www.uniprot.org/uniprot/P43821 P43821]
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** [http://www.uniprot.org/uniprot/O83678 O83678]
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** [http://www.uniprot.org/uniprot/Q9WY60 Q9WY60]
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** [http://www.uniprot.org/uniprot/Q9PPK3 Q9PPK3]
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** [http://www.uniprot.org/uniprot/P56454 P56454]
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** [http://www.uniprot.org/uniprot/Q9PN63 Q9PN63]
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** [http://www.uniprot.org/uniprot/Q57681 Q57681]
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** [http://www.uniprot.org/uniprot/P67029 P67029]
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** [http://www.uniprot.org/uniprot/O67081 O67081]
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** [http://www.uniprot.org/uniprot/O67898 O67898]
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** [http://www.uniprot.org/uniprot/O59235 O59235]
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** [http://www.uniprot.org/uniprot/P47493 P47493]
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** [http://www.uniprot.org/uniprot/Q9ZKP1 Q9ZKP1]
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** [http://www.uniprot.org/uniprot/Q9JW67 Q9JW67]
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** [http://www.uniprot.org/uniprot/P56453 P56453]
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** [http://www.uniprot.org/uniprot/O27874 O27874]
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** [http://www.uniprot.org/uniprot/Q9ZKM9 Q9ZKM9]
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** [http://www.uniprot.org/uniprot/Q9CGK0 Q9CGK0]
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** [http://www.uniprot.org/uniprot/P38088 P38088]
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** [http://www.uniprot.org/uniprot/Q06817 Q06817]
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** [http://www.uniprot.org/uniprot/Q51114 Q51114]
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** [http://www.uniprot.org/uniprot/P75425 P75425]
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** [http://www.uniprot.org/uniprot/Q55716 Q55716]
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** [http://www.uniprot.org/uniprot/P00960 P00960]
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** [http://www.uniprot.org/uniprot/P00961 P00961]
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** [http://www.uniprot.org/uniprot/Q8L785 Q8L785]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Glycyl-tRNA synthetase}}
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{{#set: common name=Anticodon-binding}}
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{{#set: ec number=EC-6.1.1.14}}
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{{#set: gene associated=Ec-07_006790|Ec-07_006780|Ec-14_006280}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:13, 21 March 2018

Gene Ec-13_002310

  • left end position:
    • 3941759
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3947285
  • centisome position:
    • 56.828247
  • Synonym(s):
    • Esi_0363_0009
    • Esi0363_0009

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_003950&oldid=16696"