Difference between revisions of "RIBOFLAVIN-SYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** monodehydroascorbate re...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
−
** monodehydroascorbate reductase (NADH)
+
** stearate biosynthesis III (fungi)
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.6.5.4 EC-1.6.5.4]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** fatty acid biosynthesis
 +
** stearic acid biosynthesis
 +
** octadecanoate biosynthesis
 +
** saturated fatty acid biosynthesis
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''6''' reactions in the full pathway
−
** 1 [[NADH]][c] '''+''' 2 [[CPD-318]][c] '''=>''' 2 [[ASCORBATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NAD]][c]
+
* [[RXN-9633]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 NADH[c] '''+''' 2 monodehydroascorbate radical[c] '''=>''' 2 L-ascorbate[c] '''+''' 1 H+[c] '''+''' 1 NAD+[c]
+
*** [[Ec-01_007100]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-esiliculosus_genome]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN-9634]]
−
* [[Ec-26_002470]]
+
** 0 associated gene:
−
** ESILICULOSUS_GENOME
+
** 1 reconstruction source(s) associated:
−
***GO-TERM
+
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
** [[pantograph]]-[[aragem]]
+
* [[RXN3O-1803]]
−
** [[pantograph]]-[[aragem]]
+
** 4 associated gene(s):
−
* [[Ec-22_003850]]
+
*** [[Ec-27_003480]]
−
** ESILICULOSUS_GENOME
+
*** [[Ec-27_002090]]
−
***GO-TERM
+
*** [[Ec-12_000650]]
−
** [[pantograph]]-[[aragem]]
+
*** [[Ec-12_000640]]
−
** [[pantograph]]-[[aragem]]
+
** 2 reconstruction source(s) associated:
−
== Pathways  ==
+
*** [[annotation-esiliculosus_genome]]
−
* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
+
*** [[orthology-aragem]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
== Reaction(s) not found ==
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624]
−
* Category: [[orthology]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5293 RXN3O-5293]
−
** Source: [[orthology-aragem]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5304 RXN3O-5304]
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-4751}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14581 14581]
+
{{#set: common name=stearate biosynthesis III (fungi)}}
−
* LIGAND-RXN:
+
{{#set: common name=fatty acid biosynthesis|stearic acid biosynthesis|octadecanoate biosynthesis|saturated fatty acid biosynthesis}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00095 R00095]
+
{{#set: reaction found=3}}
−
* UNIPROT:
+
{{#set: total reaction=6}}
−
** [http://www.uniprot.org/uniprot/Q9S926 Q9S926]
+
{{#set: completion rate=50.0}}
−
** [http://www.uniprot.org/uniprot/Q40977 Q40977]
+
−
** [http://www.uniprot.org/uniprot/Q42711 Q42711]
+
−
** [http://www.uniprot.org/uniprot/Q43497 Q43497]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=monodehydroascorbate reductase (NADH)}}
+
−
{{#set: ec number=EC-1.6.5.4}}
+
−
{{#set: gene associated=Ec-26_002470|Ec-22_003850}}
+
−
{{#set: in pathway=PWY-6370}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:13, 21 March 2018

Pathway PWY3O-355

  • taxonomic range:
  • common name:
    • stearate biosynthesis III (fungi)
  • Synonym(s):
    • fatty acid biosynthesis
    • stearic acid biosynthesis
    • octadecanoate biosynthesis
    • saturated fatty acid biosynthesis

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RIBOFLAVIN-SYN-RXN&oldid=16725"