Difference between revisions of "CPD0-2244"

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(Created page with "Category:Gene == Gene Ec-09_000810 == * left end position: ** 1012274 * transcription direction: ** NEGATIVE * right end position: ** 1023276 * centisome position: ** 18.0...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8497 RXN-8497] == * direction: ** LEFT-TO-RIGHT * common name: ** linolenate 9S-lipoxygenase *...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-09_000810 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8497 RXN-8497] ==
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* left end position:
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* direction:
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** 1012274
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** linolenate 9S-lipoxygenase
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* right end position:
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* ec number:
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** 1023276
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** [http://enzyme.expasy.org/EC/1.13.11 EC-1.13.11]
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* centisome position:
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** 18.033937   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0146_0050
 
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** Esi0146_0050
 
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** RPN1
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[2.4.1.119-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[LINOLENIC_ACID]][c] '''=>''' 1 [[CPD-8678]][c]
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***ec-number
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* With common name(s):
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* [[RXN-16761]]
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** 1 oxygen[c] '''+''' 1 α-linolenate[c] '''=>''' 1 9(S)-HPOTE[c]
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** esiliculosus_genome
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***ec-number
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== Genes associated with this reaction  ==
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== Pathways associated ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
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* [[Ec-20_003620]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-20_003630]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-03_000020]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-03_000010]]
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY-5406]], divinyl ether biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5406 PWY-5406]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5407]], 9-lipoxygenase and 9-allene oxide synthase pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5407 PWY-5407]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5408]], 9-lipoxygenase and 9-hydroperoxide lyase pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5408 PWY-5408]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6917]], vernolate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6917 PWY-6917]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=1012274}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07864 R07864]
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{{#set: right end position=1023276}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=18.033937    }}
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{{#set: common name=linolenate 9S-lipoxygenase}}
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{{#set: common name=Esi_0146_0050|Esi0146_0050|RPN1}}
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{{#set: ec number=EC-1.13.11}}
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{{#set: reaction associated=2.4.1.119-RXN|RXN-16761}}
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{{#set: gene associated=Ec-20_003620|Ec-20_003630|Ec-03_000020|Ec-03_000010}}
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{{#set: pathway associated=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: in pathway=PWY-5406|PWY-5407|PWY-5408|PWY-6917}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 21:23, 17 March 2018

Reaction RXN-8497

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • linolenate 9S-lipoxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5406, divinyl ether biosynthesis I: PWY-5406
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5407, 9-lipoxygenase and 9-allene oxide synthase pathway: PWY-5407
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5408, 9-lipoxygenase and 9-hydroperoxide lyase pathway: PWY-5408
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6917, vernolate biosynthesis III: PWY-6917
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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